RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 KCNK3O14649 394 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 BUB1O43683 1085 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 VPS41P49754 854 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 AP3M2P53677 418 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 PLA2G4FQ68DD2 849 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 TRIM7Q9C029 511 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 NOTUMQ6P988 496 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 SAMD3Q8N6K7 520 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
NR4A1-215ENST00000550557 FNDC3AQ9Y2H6 1198 aaKnown RBP13.07□□□□□ -0.32
NR4A1-215ENST00000550557 SYNGAP1Q96PV0 1343 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 RALAP11233 206 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 CDO1Q16878 200 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 MTG1Q9BT17 334 aaPredicted RBP13.07□□□□□ -0.32
NR4A1-215ENST00000550557 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 ADORA2BP29275 332 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
NR4A1-215ENST00000550557 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
NR4A1-215ENST00000550557 TTC1Q99614 292 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 MOSPD1Q9UJG1 213 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
NR4A1-215ENST00000550557 KIAA0391O15091 583 aaKnown RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 TBXAS1P24557 533 aaPredicted RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 ATP5DP30049 168 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 MXRA7P84157 204 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 GDAP1L1Q96MZ0 367 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 AP5Z1O43299 807 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 VAMP7P51809 220 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 ZNF484Q5JVG2 852 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 ZNF746Q6NUN9 644 aaPredicted RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 PHLDB2Q86SQ0 1253 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 NCAPGQ9BPX3 1015 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 FOXN1O15353 648 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 GRIK1P39086 918 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.06□□□□□ -0.322e-8■■■■■ 39.2
NR4A1-215ENST00000550557 COLEC11Q9BWP8 271 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 SENP6Q9GZR1 1112 aaPredicted RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 STAP1Q9ULZ2 295 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 HPCAL4Q9UM19 191 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 VWA5AO00534 786 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 SHMT1P34896 483 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 RBP5P82980 135 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
NR4A1-215ENST00000550557 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
NR4A1-215ENST00000550557 APOEP02649 317 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 KRT39Q6A163 491 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 MRIQ9BWK5 157 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 VPS37BQ9H9H4 285 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 DDX4Q9NQI0 724 aaKnown RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 NFIBO00712 420 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 NDUFAB1O14561 156 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 CD4P01730 458 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 CYBBP04839 570 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 KRT31Q15323 416 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 WDR72Q3MJ13 1102 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 H3BRB1 525 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 C2CD2LO14523 706 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 ATP2C2O75185 946 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 TBC1D8O95759 1140 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 CYP2C19P33261 490 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 ADCY8P40145 1251 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 E4F1Q66K89 784 aaPredicted RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 MED1Q15648 1581 aaPredicted RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 GAS2O43903 313 aaKnown RBP13.05□□□□□ -0.32
NR4A1-215ENST00000550557 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 ACRBPQ8NEB7 543 aa13.05□□□□□ -0.32
NR4A1-215ENST00000550557 VTA1Q9NP79 307 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms