RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 WEE2P0C1S8 567 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
PFDN5-210ENST00000550513 SLC11A1P49279 550 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 TCF15Q12870 199 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 EMC2Q15006 297 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 PIK3AP1Q6ZUJ8 805 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 SRGAP1Q7Z6B7 1085 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 UBALD2Q8IYN6 164 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
PFDN5-210ENST00000550513 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 DBR1Q9UK59 544 aaKnown RBP12.13□□□□□ -0.47
PFDN5-210ENST00000550513 VWA8A3KMH1 1905 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 CNTNAP2Q9UHC6 1331 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 MYH11P35749 1972 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 B4GALT3O60512 393 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 ERLIN2O94905 339 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 CYP4A11Q02928 519 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 CABP7Q86V35 215 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-210ENST00000550513 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
PFDN5-210ENST00000550513 OXER1Q8TDS5 423 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 HAS1Q92839 578 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-210ENST00000550513 MTRQ99707 1265 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 VN1R3Q9BXE9 311 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 MINDY3Q9H8M7 445 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 STK39Q9UEW8 545 aa12.12□□□□□ -0.47
PFDN5-210ENST00000550513 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
PFDN5-210ENST00000550513 BRD1O95696 1058 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-210ENST00000550513 POMCP01189 267 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
PFDN5-210ENST00000550513 AVPR2P30518 371 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 EPHA7Q15375 998 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 ATAT1Q5SQI0 421 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 UBXN11Q5T124 520 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 TMC5Q6UXY8 1006 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 OTUD6AQ7L8S5 288 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 SLC22A17Q8WUG5 538 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 DYDC2Q96IM9 177 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 TMEM175Q9BSA9 504 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 EMILIN2Q9BXX0 1053 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 ZSWIM4Q9H7M6 989 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 GJB4Q9NTQ9 266 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
PFDN5-210ENST00000550513 CITO14578 2027 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 ASAP2O43150 1006 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 PFKFB2O60825 505 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 DDHD2O94830 711 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 URODP06132 367 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 ASGR2P07307 311 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 HOXA11P31270 313 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 KRT2P35908 639 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 CTTNQ14247 550 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 KANK3Q6NY19 840 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 CCDC149Q6ZUS6 474 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 ZDHHC14Q8IZN3 488 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 WASF1Q92558 559 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 SMOC2Q9H3U7 446 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 BRMS1Q9HCU9 246 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
PFDN5-210ENST00000550513 FAM86C1Q9NVL1 165 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 RGL1Q9NZL6 768 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
PFDN5-210ENST00000550513 NRP1O14786 923 aa12.09□□□□□ -0.47
PFDN5-210ENST00000550513 TSPAN1O60635 241 aa12.09□□□□□ -0.47
PFDN5-210ENST00000550513 DTNBO60941 627 aa12.09□□□□□ -0.47
PFDN5-210ENST00000550513 SOD2P04179 222 aa12.09□□□□□ -0.47
PFDN5-210ENST00000550513 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
PFDN5-210ENST00000550513 ITGA4P13612 1032 aa12.09□□□□□ -0.47
PFDN5-210ENST00000550513 KLRC2P26717 231 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms