RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
VDR-208ENST00000550325 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CCNJLQ8IV13 435 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 GALNT15Q8N3T1 639 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 DYDC2Q96IM9 177 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 PODXLO00592 558 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 ECEL1O95672 775 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 KRT15P19012 456 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 RASSF2P50749 326 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 NSMFQ6X4W1 530 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 ASRGL1Q7L266 308 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 SFR1Q86XK3 245 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 PPFIBP2Q8ND30 876 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CARD9Q9H257 536 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 AKAP3O75969 853 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 RNF8O76064 485 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 GJB6O95452 261 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CHKAP35790 457 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CACNA2D1P54289 1103 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 ZBTB16Q05516 673 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
VDR-208ENST00000550325 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 CCDC24Q8N4L8 307 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
VDR-208ENST00000550325 DENND2DQ9H6A0 471 aaPredicted RBP12.99□□□□□ -0.33
VDR-208ENST00000550325 NMRK1Q9NWW6 199 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
VDR-208ENST00000550325 PITPNM2Q9BZ72 1349 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 FAM196BA6NMK8 535 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 SKIP12755 728 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 LMNB1P20700 586 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 GJC1P36383 396 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 ADCY8P40145 1251 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 AGGF1Q8N302 714 aaeCLIP12.98□□□□□ -0.33
VDR-208ENST00000550325 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 SEC14L1Q92503 715 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 ATP8A2Q9NTI2 1148 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 CNOT7Q9UIV1 285 aaKnown RBP12.98□□□□□ -0.33
VDR-208ENST00000550325 BTNL10A8MVZ5 291 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 GCLCP48506 637 aaPredicted RBP12.98□□□□□ -0.33
VDR-208ENST00000550325 CYP2J2P51589 502 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 CPNE8Q86YQ8 564 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 C4orf33Q8N1A6 199 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 CRAMP1Q96RY5 1269 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 ANKIB1Q9P2G1 1089 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 STOML1Q9UBI4 398 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 PHTF1Q9UMS5 762 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 OAS1P00973 400 aaKnown RBP12.98□□□□□ -0.33
VDR-208ENST00000550325 ETS2P15036 469 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 TAF1BQ53T94 588 aaPredicted RBP12.98□□□□□ -0.33
VDR-208ENST00000550325 SNX30Q5VWJ9 437 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 MIGA2Q7L4E1 593 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.98□□□□□ -0.33
VDR-208ENST00000550325 WDR35Q9P2L0 1181 aa12.98□□□□□ -0.33
VDR-208ENST00000550325 TRIM49P0CI25 452 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 TRIM49CP0CI26 452 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 FOXN2P32314 431 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 KRT17Q04695 432 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 RRP1BQ14684 758 aaKnown RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 CCDC134Q9H6E4 229 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 ZFP69BQ9UJL9 534 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 LRRC42Q9Y546 428 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 KIF1AQ12756 1690 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 CAPN9O14815 690 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 GNAZP19086 355 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 COMTP21964 271 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 CDR2Q01850 454 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 CYTH2Q99418 400 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 BCAS3Q9H6U6 928 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms