RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM175Q9BSA9 504 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 KCNK12Q9HB15 430 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 IFT122Q9HBG6 1241 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 IGSF9Q9P2J2 1179 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 DNAJB4Q9UDY4 337 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 SEPT9Q9UHD8 586 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 PIN4Q9Y237 131 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 PCDHB2Q9Y5E7 798 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 C2orf16Q68DN1 1984 aa11.06□□□□□ -0.64
TRAFD1-207ENST00000550051 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 TMEM150BA6NC51 233 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 M0R2N6 131 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 CHMP2AO43633 222 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 PI15O43692 258 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 DDHD2O94830 711 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 PAPLNO95428 1278 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 C1RP00736 705 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 CPA1P15085 419 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 PDIA3P30101 505 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 NLRP5P59047 1200 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 PSMC5P62195 406 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 CWF19L1Q69YN2 538 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 MOXD1Q6UVY6 613 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 FEZF2Q8TBJ5 459 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 URGCPQ8TCY9 931 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 GJA10Q969M2 543 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 RTP3Q9BQQ7 232 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 SLC26A6Q9BXS9 759 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 MRPL17Q9NRX2 175 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 AGPAT5Q9NUQ2 364 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 VPS54Q9P1Q0 977 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 WNT16Q9UBV4 365 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 DUSP12Q9UNI6 340 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
TRAFD1-207ENST00000550051 DMDP11532 3685 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 SPTBN4Q9H254 2564 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 MTCL1Q9Y4B5 1905 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 NRP1O14786 923 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 B4GALT3O60512 393 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 EFEMP2O95967 443 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 HOXA11P31270 313 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 HSPA4P34932 840 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 SRGAP1Q7Z6B7 1085 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 FRMD5Q7Z6J6 570 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 DTWD2Q8NBA8 298 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 CNNM3Q8NE01 707 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 FLCNQ8NFG4 579 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 ETNPPLQ8TBG4 499 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 HDAC7Q8WUI4 952 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 NXPE3Q969Y0 559 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 NLRP4Q96MN2 994 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 SEMA4AQ9H3S1 761 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 UBN1Q9NPG3 1134 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 DPP7Q9UHL4 492 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 PCDHA4Q9UN74 947 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 INPP5FQ9Y2H2 1132 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 PPME1Q9Y570 386 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 CNTNAP2Q9UHC6 1331 aa11.04□□□□□ -0.64
TRAFD1-207ENST00000550051 INPPL1O15357 1258 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 ASAP2O43150 1006 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 CDC45O75419 566 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 TDP2O95551 362 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 SOD2P04179 222 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 QARSP47897 775 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 UBXN11Q5T124 520 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 KIAA0319Q5VV43 1072 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 GALNT17Q6IS24 598 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 BLIDQ8IZY5 108 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 ADSSL1Q8N142 457 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 EFCAB3Q8N7B9 438 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 DAGLBQ8NCG7 672 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 PRPF31Q8WWY3 499 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 RSAD1Q9HA92 442 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms