RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 TRAK2O60296 914 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 TSPAN1O60635 241 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 GJB5O95377 273 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PRKCBP05771 671 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 AXLP30530 894 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 HOXA11P31270 313 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 EFNA5P52803 228 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 RAB30Q15771 203 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 RNF169Q8NCN4 708 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 MRPS27Q92552 414 aaKnown RBP10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 YME1L1Q96TA2 773 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 RAD9AQ99638 391 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 TNMDQ9H2S6 317 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 NKX2-4Q9H2Z4 354 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 AGPAT5Q9NUQ2 364 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PANK4Q9NVE7 773 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
RAB5B-205ENST00000549034 GBF1Q92538 1859 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 PTPRSQ13332 1948 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 ACKR2O00590 384 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 PRPF40AO75400 957 aaKnown RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF202O95125 648 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 EOMESO95936 686 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 SLFN14P0C7P3 912 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 CHRM1P11229 460 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 SKIP12755 728 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 ARF4P18085 180 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 NMT1P30419 496 aaKnown RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 STRN3Q13033 797 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 AMHR2Q16671 573 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 FAM187BQ17R55 369 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 HAUS6Q7Z4H7 955 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 ECHDC2Q86YB7 292 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 CCDC65Q8IXS2 484 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 CNNM3Q8NE01 707 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 DNAJC19Q96DA6 116 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 PAGE5Q96GU1 130 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 C7orf25Q9BPX7 421 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 TRIM6Q9C030 488 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 BLZF1Q9H2G9 400 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 GOLPH3LQ9H4A5 285 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 SLC28A3Q9HAS3 691 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 FAM105AQ9NUU6 356 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
RAB5B-205ENST00000549034 ADGRA3Q8IWK6 1321 aa10.57□□□□□ -0.72
RAB5B-205ENST00000549034 FAM237AA0A1B0GTK4 181 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 H0YCG3 227 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 K7ENM7 598 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
RAB5B-205ENST00000549034 DGKIO75912 1065 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 GAP43P17677 238 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 DNAJB2P25686 324 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 CASP1P29466 404 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF131P52739 623 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 ASIC1P78348 528 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 UBXN11Q5T124 520 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 NT5DC1Q5TFE4 455 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 NOTUMQ6P988 496 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 SFR1Q86XK3 245 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 GRAMD1CQ8IYS0 662 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TMEM161BQ8NDZ6 487 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TIFAQ96CG3 184 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 PGBD4Q96DM1 585 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TCHPQ9BT92 498 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TARS2Q9BW92 718 aaKnown RBP10.56□□□□□ -0.72
RAB5B-205ENST00000549034 EIF2AQ9BY44 585 aaKnown RBP10.56□□□□□ -0.72
RAB5B-205ENST00000549034 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 ELAC1Q9H777 363 aaKnown RBP10.56□□□□□ -0.72
RAB5B-205ENST00000549034 MRPL44Q9H9J2 332 aaKnown RBP10.56□□□□□ -0.72
RAB5B-205ENST00000549034 MAGEF1Q9HAY2 307 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TMEM161AQ9NX61 479 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 ARHGAP28Q9P2N2 729 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
RAB5B-205ENST00000549034 TBKBP1A7MCY6 615 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 N4BP3O15049 544 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF623O75123 536 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 NPTXRO95502 500 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 CA3P07451 260 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms