RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 GABBR1Q9UBS5 961 aa15.24■□□□□ 0.03
CACNB3-209ENST00000548860 SRGAP2CP0DJJ0 459 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 SPATA31C1P0DKV0 1188 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 GPC5P78333 572 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 STRN3Q13033 797 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 PTGISQ16647 500 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 TRIM68Q6AZZ1 485 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 JAMLQ86YT9 394 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 EPN3Q9H201 632 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-209ENST00000548860 ECEL1O95672 775 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 EZRP15311 586 aaKnown RBP15.23■□□□□ 0.03
CACNB3-209ENST00000548860 MAP2K2P36507 400 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 CUL1Q13616 776 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 EDRF1Q3B7T1 1238 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 SPOPLQ6IQ16 392 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 ZNF449Q6P9G9 518 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 CCDC197Q8NCU1 140 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 TMEM143Q96AN5 459 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 CYFIP2Q96F07 1278 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 KCNH7Q9NS40 1196 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-209ENST00000548860 PDE4DIPQ5VU43 2346 aa15.23■□□□□ 0.03
CACNB3-209ENST00000548860 ATF2P15336 505 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 EAPPQ56P03 285 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 NSRP1Q9H0G5 558 aaKnown RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 TJP1Q07157 1748 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 GOLGA8RI6L899 631 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 IRF2BP2Q7Z5L9 587 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 P2RX7Q99572 595 aaKnown RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 KCTD10Q9H3F6 313 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.22■□□□□ 0.03
CACNB3-209ENST00000548860 IGSF9BQ9UPX0 1349 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 F8VZ95 297 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 MFAP3P55082 362 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 DEPTORQ8TB45 409 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 CCDC77Q9BR77 488 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 WDR18Q9BV38 432 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 STK33Q9BYT3 514 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
CACNB3-209ENST00000548860 CCDC188H7C350 402 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 MAP3K6O95382 1288 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 GAS8O95995 478 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ZNF131P52739 623 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 JAG1P78504 1218 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ORC1Q13415 861 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 KIAA1755Q5JYT7 1200 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-209ENST00000548860 RAPGEF5Q92565 580 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 KLF6Q99612 283 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ISCUQ9H1K1 167 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 GANQ9H2C0 597 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ANAPC5Q9UJX4 755 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 TAAR1Q96RJ0 339 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ZWILCHQ9H900 591 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 PPATQ06203 517 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 PPP2R5DQ14738 602 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 SCYL2Q6P3W7 929 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 CTAGE3PQ8IX95 158 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 NIM1KQ8IY84 436 aa15.21■□□□□ 0.03
CACNB3-209ENST00000548860 H0Y3Z8 333 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 ZBED4O75132 1171 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 YWHABP31946 246 aaKnown RBP15.21■□□□□ 0.02
CACNB3-209ENST00000548860 CLNS1AP54105 237 aaKnown RBP15.21■□□□□ 0.02
CACNB3-209ENST00000548860 ZNF844Q08AG5 666 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 EPHA7Q15375 998 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 PHLDB3Q6NSJ2 640 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 PPP1R21Q6ZMI0 780 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 THNSL1Q8IYQ7 743 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.02
CACNB3-209ENST00000548860 HVCN1Q96D96 273 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.02
CACNB3-209ENST00000548860 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 EDEM3Q9BZQ6 932 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 NYAP2Q9P242 653 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 IKBKGQ9Y6K9 419 aa15.21■□□□□ 0.02
CACNB3-209ENST00000548860 ASTN1O14525 1302 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 PEX10O60683 326 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 CDK17Q00537 523 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 PPP3CAQ08209 521 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 INTS8Q75QN2 995 aaKnown RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 IL31RAQ8NI17 732 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms