RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 EPHA7Q15375 998 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 AGMOQ6ZNB7 445 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 DDX53Q86TM3 631 aaKnown RBP22.74■■□□□ 1.23
SSH1-207ENST00000547862 RNF149Q8NC42 400 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 FAM193BQ96PV7 902 aaPredicted RBP22.74■■□□□ 1.23
SSH1-207ENST00000547862 PHOX2BQ99453 314 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 VN1R3Q9BXE9 311 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 ADAM7Q9H2U9 754 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 DHX33Q9H6R0 707 aaKnown RBP22.74■■□□□ 1.23
SSH1-207ENST00000547862 ZBTB39O15060 712 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 ERLIN2O94905 339 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 CTDNEP1O95476 244 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 PDGFBP01127 241 aaPredicted RBP22.73■■□□□ 1.23
SSH1-207ENST00000547862 POMCP01189 267 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 AFF1P51825 1210 aaKnown RBP22.73■■□□□ 1.23
SSH1-207ENST00000547862 AK2P54819 239 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 ITIH3Q06033 890 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 SRGAP1Q7Z6B7 1085 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 NECAB1Q8N987 351 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 KREMEN2Q8NCW0 462 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 FEZF2Q8TBJ5 459 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 ASIC4Q96FT7 647 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 RIPOR3Q96MK2 946 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 NECTIN4Q96NY8 510 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 MTRQ99707 1265 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 NAP1L4Q99733 375 aaKnown RBP22.73■■□□□ 1.23
SSH1-207ENST00000547862 SMOC2Q9H3U7 446 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 DZANK1Q9NVP4 752 aa22.73■■□□□ 1.23
SSH1-207ENST00000547862 DBR1Q9UK59 544 aaKnown RBP22.73■■□□□ 1.23
SSH1-207ENST00000547862 TBX3O15119 743 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 DDHD2O94830 711 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 BAG4O95429 457 aaKnown RBP22.72■■□□□ 1.23
SSH1-207ENST00000547862 MTHFRP42898 656 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 PTPN14Q15678 1187 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 OTUD6AQ7L8S5 288 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 CABP7Q86V35 215 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 TPH2Q8IWU9 490 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 C4orf19Q8IY42 314 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 TDRD5Q8NAT2 981 aaKnown RBP22.72■■□□□ 1.23
SSH1-207ENST00000547862 TCP11Q8WWU5 503 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 RSPH1Q8WYR4 309 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 CCDC43Q96MW1 224 aaKnown RBP22.72■■□□□ 1.23
SSH1-207ENST00000547862 APOL6Q9BWW8 343 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 BRMS1Q9HCU9 246 aa22.72■■□□□ 1.23
SSH1-207ENST00000547862 PRG3Q9Y2Y8 225 aaPredicted RBP22.72■■□□□ 1.23
SSH1-207ENST00000547862 C2CD2LO14523 706 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 ZNF623O75123 536 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 LARGE1O95461 756 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 NEFLP07196 543 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 ASGR2P07307 311 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 PTPN5P54829 565 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 UBXN11Q5T124 520 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 KIAA1841Q6NSI8 718 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 TMC5Q6UXY8 1006 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 FERMT3Q86UX7 667 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 EXOC8Q8IYI6 725 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 WASF1Q92558 559 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 CPB2Q96IY4 423 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 ZSWIM4Q9H7M6 989 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 FAM86C1Q9NVL1 165 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 PPME1Q9Y570 386 aa22.71■■□□□ 1.23
SSH1-207ENST00000547862 SPIRE1Q08AE8 756 aa22.7■■□□□ 1.22
SSH1-207ENST00000547862 MTMR3Q13615 1198 aa22.7■■□□□ 1.22
SSH1-207ENST00000547862 GIT2Q14161 759 aa22.7■■□□□ 1.22
SSH1-207ENST00000547862 SLFN12Q8IYM2 578 aa22.7■■□□□ 1.22
SSH1-207ENST00000547862 EIF2AK1Q9BQI3 630 aaKnown RBP22.7■■□□□ 1.22
SSH1-207ENST00000547862 EIF2AQ9BY44 585 aaKnown RBP22.7■■□□□ 1.22
SSH1-207ENST00000547862 CNTNAP2Q9UHC6 1331 aa22.7■■□□□ 1.22
SSH1-207ENST00000547862 CARNS1A5YM72 827 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 INO80B-WBP1J3KQ70 363 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 GAS2O43903 313 aaKnown RBP22.69■■□□□ 1.22
SSH1-207ENST00000547862 BRD1O95696 1058 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 ITGA4P13612 1032 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 KLRC2P26717 231 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 HOXA11P31270 313 aaPredicted RBP22.69■■□□□ 1.22
SSH1-207ENST00000547862 CALCRLQ16602 461 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 SLC22A17Q8WUG5 538 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 XPNPEP1Q9NQW7 623 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 SORCS3Q9UPU3 1222 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 FAN1Q9Y2M0 1017 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 HES2Q9Y543 173 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 IPPQ9Y573 584 aa22.69■■□□□ 1.22
SSH1-207ENST00000547862 TSPAN1O60635 241 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 MYBP10242 640 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 MLH1P40692 756 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 OR1G1P47890 313 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 TCF15Q12870 199 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 ANKRD1Q15327 319 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 ATAT1Q5SQI0 421 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 MRPL10Q7Z7H8 261 aaKnown RBP22.68■■□□□ 1.22
SSH1-207ENST00000547862 SMG8Q8ND04 991 aaKnown RBP22.68■■□□□ 1.22
SSH1-207ENST00000547862 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 SFXN1Q9H9B4 322 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 IRAK3Q9Y616 596 aa22.68■■□□□ 1.22
SSH1-207ENST00000547862 WNT7AO00755 349 aa22.67■■□□□ 1.22
SSH1-207ENST00000547862 NRP1O14786 923 aa22.67■■□□□ 1.22
SSH1-207ENST00000547862 URODP06132 367 aa22.67■■□□□ 1.22
SSH1-207ENST00000547862 FDPSP14324 419 aaKnown RBP22.67■■□□□ 1.22
SSH1-207ENST00000547862 NCLP19338 710 aaKnown RBP22.67■■□□□ 1.22
SSH1-207ENST00000547862 ME3Q16798 604 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms