RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 B4GALT5O43286 388 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 ADCY6O43306 1168 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
CCDC38-202ENST00000546386 ASIC2Q16515 512 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 SLC9C1Q4G0N8 1177 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 NFRKBQ6P4R8 1299 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 FASTKD5Q7L8L6 764 aaKnown RBP13.02□□□□□ -0.33
CCDC38-202ENST00000546386 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.33
CCDC38-202ENST00000546386 XXYLT1Q8NBI6 393 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 MS4A14Q96JA4 679 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 STRA6Q9BX79 667 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 ZHX1Q9UKY1 873 aaPredicted RBP13.02□□□□□ -0.33
CCDC38-202ENST00000546386 MRFAP1Q9Y605 127 aa13.02□□□□□ -0.33
CCDC38-202ENST00000546386 WDR90Q96KV7 1748 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 FGFR4P22455 802 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 FECHP22830 423 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 TNFSF9P41273 254 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 GTF2BQ00403 316 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 CEP120Q8N960 986 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 NOA1Q8NC60 698 aaKnown RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 NEK9Q8TD19 979 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 COG1Q8WTW3 980 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 IWS1Q96ST2 819 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 EVI5O60447 810 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 KRT13P13646 458 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 LIG4P49917 911 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 U2AF1L4Q8WU68 220 aaKnown RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 UBXN4Q92575 508 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 TATDN2Q93075 761 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 MAFBQ9Y5Q3 323 aaPredicted RBP13.01□□□□□ -0.33
CCDC38-202ENST00000546386 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
CCDC38-202ENST00000546386 EVPLQ92817 2033 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 EIF3CLB5ME19 914 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 K7ERI5 159 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 DGAT1O75907 488 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 VTNP04004 478 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 CCL14Q16627 93 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 STXBP4Q6ZWJ1 553 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 DEPTORQ8TB45 409 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 GPR20Q99678 358 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 NAPGQ99747 312 aaPredicted RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 SEL1LQ9UBV2 794 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 A0A1W2PQJ5 194 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 MAFGO15525 162 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 KRT86O43790 486 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 TNNI1P19237 187 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 CYP2C19P33261 490 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 NCKAP1LP55160 1127 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 KRT83P78385 493 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 ZC3H3Q8IXZ2 948 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 SEPT1Q8WYJ6 367 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 SECISBP2LQ93073 1101 aaKnown RBP13□□□□□ -0.33
CCDC38-202ENST00000546386 CDHR1Q96JP9 859 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 IFT74Q96LB3 600 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 MMS19Q96T76 1030 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 IVNS1ABPQ9Y6Y0 642 aa13□□□□□ -0.33
CCDC38-202ENST00000546386 PDE2AO00408 941 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 CBX1P83916 185 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 CAPSQ13938 189 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 HSP90AA2PQ14568 343 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 THNSL1Q8IYQ7 743 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 KCND2Q9NZV8 630 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 INO80B-WBP1J3KQ70 363 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-202ENST00000546386 LYPLA2O95372 231 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 SERPING1P05155 500 aa12.99□□□□□ -0.33
CCDC38-202ENST00000546386 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms