RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TTC9Q92623 222 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 HAS1Q92839 578 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 FAM20AQ96MK3 541 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 IPO9Q96P70 1041 aaKnown RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 MTMR9Q96QG7 549 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 GPR20Q99678 358 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 TEKT3Q9BXF9 490 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 BCAS3Q9H6U6 928 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 TBC1D22BQ9NU19 505 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 CEP131Q9UPN4 1083 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ZDHHC9Q9Y397 364 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 TELO2Q9Y4R8 837 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 RANBP2P49792 3224 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 A0A1W2PQ45 241 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 A0A1W2PQY0 241 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 C1QTNF9BB2RNN3 333 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 ZBTB39O15060 712 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 ZEB2O60315 1214 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 RGS9O75916 674 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 BAG4O95429 457 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 F2P00734 622 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 TFRCP02786 760 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 LGALS2P05162 132 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SUPT20HL2P0C7V6 817 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SFNP31947 248 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SOX18P35713 384 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 TCF7P36402 384 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 PRPHP41219 470 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 JAK3P52333 1124 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 PURAQ00577 322 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SPIRE1Q08AE8 756 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 TMEM266Q2M3C6 531 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 FOXD4L6Q3SYB3 417 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 NCAPH2Q6IBW4 605 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 CCSAPQ6IQ19 270 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 B3GNT9Q6UX72 402 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 FOXD4L3Q6VB84 417 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 PCSK9Q8NBP7 692 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 RDM1Q8NG50 284 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF396Q96N95 335 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 USP28Q96RU2 1077 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 UNC45AQ9H3U1 944 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 TTC12Q9H892 705 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF215Q9UL58 517 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-211ENST00000546304 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
PRKDC-211ENST00000546304 LAMA2P24043 3122 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 EVPLQ92817 2033 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 KPNA6O60684 536 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MMP20O60882 483 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 YEATS4O95619 227 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 ASGR1P07306 291 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PSAPP07602 524 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MYL3P08590 195 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CPB1P15086 417 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CAPN2P17655 700 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 NCLP19338 710 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 TXKP42681 527 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CHRNA4P43681 627 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 ACLYP53396 1101 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 KRT85P78386 507 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PLAURQ03405 335 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CEBPZQ03701 1054 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 DNM1Q05193 864 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PTPAQ15257 358 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 KCNA10Q16322 511 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PERM1Q5SV97 790 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 ARL6IP4Q66PJ3 421 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 ATL3Q6DD88 541 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MIS18BP1Q6P0N0 1132 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MIER3Q7Z3K6 550 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CCDC60Q8IWA6 550 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 C4orf32Q8N8J7 132 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 NUDT8Q8WV74 236 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 SEPT1Q8WYJ6 367 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 GLT1D1Q96MS3 346 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 LPIN3Q9BQK8 851 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MTG1Q9BT17 334 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 KATNAL1Q9BW62 490 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 AZI2Q9H6S1 392 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 DISC1Q9NRI5 854 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CHMP5Q9NZZ3 219 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 PCDHA12Q9UN75 941 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 USTQ9Y2C2 406 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 CLIC4Q9Y696 253 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MORC2Q9Y6X9 1032 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-211ENST00000546304 SIP14410 1827 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 LTBP2Q14767 1821 aa7.1□□□□□ -1.27
PRKDC-211ENST00000546304 MYH11P35749 1972 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 IGKV6D-21A0A0A0MT36 114 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 GSTTP1A0A1W2PQM5 241 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms