RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 KPNA6O60684 536 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 C6orf222P0C671 652 aaPredicted RBP21.23■□□□□ 0.99
SKP2-208ENST00000546211 SMIM10L2AP0DMW4 78 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 SMIM10L2BP0DMW5 78 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 RARBP10826 455 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 ELNP15502 786 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 FXR1P51114 621 aaKnown RBP eCLIP21.23■□□□□ 0.99
SKP2-208ENST00000546211 GJA9P57773 515 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 IRX5P78411 483 aaPredicted RBP21.23■□□□□ 0.99
SKP2-208ENST00000546211 TRIM32Q13049 653 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 FIGNQ5HY92 759 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 SLC39A4Q6P5W5 647 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 NLRP4Q96MN2 994 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 PANX2Q96RD6 677 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 MMRN2Q9H8L6 949 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 PYCARDQ9ULZ3 195 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 AKT3Q9Y243 479 aa21.23■□□□□ 0.99
SKP2-208ENST00000546211 SIP14410 1827 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 KIAA0391O15091 583 aaKnown RBP21.22■□□□□ 0.99
SKP2-208ENST00000546211 FKTNO75072 461 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 KLK7P49862 253 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 BFSP1Q12934 665 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 HSP90AA2PQ14568 343 aaPredicted RBP21.22■□□□□ 0.99
SKP2-208ENST00000546211 MAPK6Q16659 721 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 MARCH8Q5T0T0 291 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 SLFN12LQ6IEE8 588 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 RAET1EQ8TD07 263 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 MAP7D2Q96T17 732 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 SETD4Q9NVD3 440 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 CAPN11Q9UMQ6 739 aa21.22■□□□□ 0.99
SKP2-208ENST00000546211 LUC7L2Q9Y383 392 aaKnown RBP21.22■□□□□ 0.99
SKP2-208ENST00000546211 TTC26A0AVF1 554 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 HAS3O00219 553 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 HMGCRP04035 888 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 GJB1P08034 283 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 PRKAR2AP13861 404 aaKnown RBP21.21■□□□□ 0.99
SKP2-208ENST00000546211 POU5F1BQ06416 359 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 CCDC155Q8N6L0 562 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 NEK11Q8NG66 645 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 LMBR1Q8WVP7 490 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 CCDC113Q9H0I3 377 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 UPF3AQ9H1J1 476 aaKnown RBP21.21■□□□□ 0.99
SKP2-208ENST00000546211 TMX1Q9H3N1 280 aa21.21■□□□□ 0.99
SKP2-208ENST00000546211 A0A1W2PQJ5 194 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 GOLGA8IPA6NC78 632 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 GOLGA8JA6NMD2 632 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 ZEB2O60315 1214 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 PRKCBP05771 671 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 KRT9P35527 623 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 PHKA2P46019 1235 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 PTENP60484 403 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 PURAQ00577 322 aaKnown RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 SNRNP35Q16560 246 aaKnown RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 GNASQ5JWF2 1037 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 NFRKBQ6P4R8 1299 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 ZPBP2Q6X784 338 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 GPD1LQ8N335 351 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 KIAA1524Q8TCG1 905 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 SAAL1Q96ER3 474 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 BAG1Q99933 345 aaPredicted RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 TARS2Q9BW92 718 aaKnown RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 MRPL4Q9BYD3 311 aaKnown RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 NFKBIZQ9BYH8 718 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 TTYH3Q9C0H2 523 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 KIAA1586Q9HCI6 787 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 FAM207AQ9NSI2 230 aaPredicted RBP21.2■□□□□ 0.98
SKP2-208ENST00000546211 STYXL1Q9Y6J8 313 aa21.2■□□□□ 0.98
SKP2-208ENST00000546211 STX10O60499 249 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 MATR3P43243 847 aaKnown RBP eCLIP21.19■□□□□ 0.986e-7■■■■□ 23.7
SKP2-208ENST00000546211 VAMP7P51809 220 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 KCNMA1Q12791 1236 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 TSR1Q2NL82 804 aaKnown RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 ZNF397Q8NF99 534 aaPredicted RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 FBXL18Q96ME1 805 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 NAA15Q9BXJ9 866 aaKnown RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 ABHD10Q9NUJ1 306 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 GTPBP10A4D1E9 387 aaKnown RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 INO80B-WBP1J3KQ70 363 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 MSCO60682 206 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 CCND3P30281 292 aaPredicted RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 GBP6Q6ZN66 633 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 CBWD2Q8IUF1 395 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 ZSWIM2Q8NEG5 633 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 PXYLP1Q8TE99 480 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 ZNF668Q96K58 619 aaPredicted RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 LSM14BQ9BX40 385 aaKnown RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 INO80BQ9C086 356 aaPredicted RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 XPNPEP3Q9NQH7 507 aa21.19■□□□□ 0.98
SKP2-208ENST00000546211 AGO2Q9UKV8 859 aaKnown RBP21.19■□□□□ 0.98
SKP2-208ENST00000546211 MYADML2A6NDP7 307 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 RNF225M0QZC1 329 aaPredicted RBP21.18■□□□□ 0.98
SKP2-208ENST00000546211 LDHAP00338 332 aaKnown RBP21.18■□□□□ 0.98
SKP2-208ENST00000546211 PGK1P00558 417 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 VTNP04004 478 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 TRIM49P0CI25 452 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 TRIM49CP0CI26 452 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 FMO5P49326 533 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 PRMT2P55345 433 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 NKX3-2P78367 333 aa21.18■□□□□ 0.98
SKP2-208ENST00000546211 ZBED6P86452 979 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms