RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 KCNT2Q6UVM3 1135 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 GLB1LQ6UWU2 654 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 AGMOQ6ZNB7 445 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 IFNLR1Q8IU57 520 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-206ENST00000546155 ZBTB8OSQ8IWT0 167 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 PGBD4Q96DM1 585 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 ZNF558Q96NG5 402 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 PNMA5Q96PV4 448 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 KIFC3Q9BVG8 833 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 TRAIPQ9BWF2 469 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 APOL6Q9BWW8 343 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 GBP3Q9H0R5 595 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 TFIP11Q9UBB9 837 aaKnown RBP22.26■■□□□ 1.15
LTBP4-206ENST00000546155 EYSQ5T1H1 3165 aa22.26■■□□□ 1.15
LTBP4-206ENST00000546155 NT5C1B-RDH14C9J2C7 533 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 SLC26A4O43511 780 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 ZNF623O75123 536 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 OFD1O75665 1012 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 YEATS4O95619 227 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 ARF4P18085 180 aaPredicted RBP22.25■■□□□ 1.15
LTBP4-206ENST00000546155 MARCKSP29966 332 aaPredicted RBP22.25■■□□□ 1.15
LTBP4-206ENST00000546155 GTF2F1P35269 517 aaKnown RBP eCLIP22.25■■□□□ 1.154e-11■■■■■ 27.7
LTBP4-206ENST00000546155 TMEM132AQ24JP5 1023 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 NOMO2Q5JPE7 1267 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 NOTUMQ6P988 496 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 CABP7Q86V35 215 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 DEPTORQ8TB45 409 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 CDK5RAP3Q96JB5 506 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 RUSC1Q9BVN2 902 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 RNF39Q9H2S5 420 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 UBE2ZQ9H832 354 aaPredicted RBP22.25■■□□□ 1.15
LTBP4-206ENST00000546155 HES2Q9Y543 173 aa22.25■■□□□ 1.15
LTBP4-206ENST00000546155 ITGA4P13612 1032 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 KCNA5P22460 613 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 AXLP30530 894 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 ANP32AP39687 249 aaKnown RBP22.24■■□□□ 1.15
LTBP4-206ENST00000546155 AFF1P51825 1210 aaKnown RBP22.24■■□□□ 1.15
LTBP4-206ENST00000546155 RNASELQ05823 741 aaKnown RBP22.24■■□□□ 1.15
LTBP4-206ENST00000546155 MRPL10Q7Z7H8 261 aaKnown RBP22.24■■□□□ 1.15
LTBP4-206ENST00000546155 ADGRD2Q7Z7M1 963 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 KCTD17Q8N5Z5 321 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 SMG8Q8ND04 991 aaKnown RBP22.24■■□□□ 1.15
LTBP4-206ENST00000546155 IFT74Q96LB3 600 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 CSRNP2Q9H175 543 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 IPPQ9Y573 584 aa22.24■■□□□ 1.15
LTBP4-206ENST00000546155 TTLL13PA6NNM8 815 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 ZC3H11AO75152 810 aaKnown RBP eCLIP22.23■■□□□ 1.15
LTBP4-206ENST00000546155 PPP6R2O75170 966 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 NPTXRO95502 500 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 DNM1Q05193 864 aaKnown RBP22.23■■□□□ 1.15
LTBP4-206ENST00000546155 RAD51AP2Q09MP3 1159 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 HYAL1Q12794 435 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 AAK1Q2M2I8 961 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 RBM23Q86U06 439 aaKnown RBP22.23■■□□□ 1.15
LTBP4-206ENST00000546155 MRPL9Q9BYD2 267 aaKnown RBP22.23■■□□□ 1.15
LTBP4-206ENST00000546155 NFKBIZQ9BYH8 718 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 TRIM6Q9C030 488 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-206ENST00000546155 RSAD1Q9HA92 442 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 TBC1D13Q9NVG8 400 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 TCHHQ07283 1943 aa22.23■■□□□ 1.15
LTBP4-206ENST00000546155 SFI1A8K8P3 1242 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 H3BQ06 376 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-206ENST00000546155 SPTLC2O15270 562 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 HIP1RO75146 1068 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 NAMPTP43490 491 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 BCAR1P56945 870 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 ERVFC1P60507 584 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 NUCB2P80303 420 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 STK38Q15208 465 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 PCBP1Q15365 356 aaKnown RBP eCLIP22.22■■□□□ 1.151e-7■■■■■ 43.7
LTBP4-206ENST00000546155 CDCA2Q69YH5 1023 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-206ENST00000546155 RINT1Q6NUQ1 792 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 KRI1Q8N9T8 703 aaKnown RBP22.22■■□□□ 1.15
LTBP4-206ENST00000546155 KIFAP3Q92845 792 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 CCSER1Q9C0I3 900 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 NRDE2Q9H7Z3 1164 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 SPG21Q9NZD8 308 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 DAXXQ9UER7 740 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-206ENST00000546155 CFAP45Q9UL16 551 aa22.22■■□□□ 1.15
LTBP4-206ENST00000546155 PRUNE2Q8WUY3 3088 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 CCDC169A6NNP5 214 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 POMCP01189 267 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 PRKCBP05771 671 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 NCLP19338 710 aaKnown RBP22.21■■□□□ 1.15
LTBP4-206ENST00000546155 UBA7P41226 1012 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 DHX8Q14562 1220 aaKnown RBP22.21■■□□□ 1.15
LTBP4-206ENST00000546155 PPP2R5AQ15172 486 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 CSPP1Q1MSJ5 1256 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 FOXD4L6Q3SYB3 417 aaPredicted RBP22.21■■□□□ 1.15
LTBP4-206ENST00000546155 TMEM119Q4V9L6 283 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 SPECC1Q5M775 1068 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 FOXD4L3Q6VB84 417 aaPredicted RBP22.21■■□□□ 1.15
LTBP4-206ENST00000546155 ZNF280BQ86YH2 543 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 RASSF8Q8NHQ8 419 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 URGCPQ8TCY9 931 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 SYMPKQ92797 1274 aaKnown RBP22.21■■□□□ 1.15
LTBP4-206ENST00000546155 CCDC51Q96ER9 411 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 CLIC6Q96NY7 704 aa22.21■■□□□ 1.15
LTBP4-206ENST00000546155 NECAB3Q96P71 396 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms