RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 THOC1Q96FV9 657 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 IFIH1Q9BYX4 1025 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 HPCAL4Q9UM19 191 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 MYH3P11055 1940 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 GH1P01241 217 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 IGFBP4P22692 258 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 SFNP31947 248 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 STAT5BP51692 787 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 GRIN1Q05586 938 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 BRD3Q15059 726 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 KAZNQ674X7 775 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 RWDD4Q6NW29 188 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 ERO1BQ86YB8 467 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 FAM71BQ8TC56 605 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 DNAJC18Q9H819 358 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 GOLGA8IPA6NC78 632 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 GOLGA8JA6NMD2 632 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 EIF4E1BA6NMX2 242 aaKnown RBP9.21□□□□□ -0.93
CLIP1-218ENST00000545889 PLCG1P19174 1290 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 NLRP12P59046 1061 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 CPLX4Q7Z7G2 160 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 KLHL7Q8IXQ5 586 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 MCUQ8NE86 351 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 SCFD2Q8WU76 684 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 STK17AQ9UEE5 414 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.93
CLIP1-218ENST00000545889 FZD9O00144 591 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 SASH3O75995 380 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 RPN1P04843 607 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 TUBB4BP68371 445 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 ALCAMQ13740 583 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 SETDB1Q15047 1291 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 IQCB1Q15051 598 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 LRRC41Q15345 812 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 DBN1Q16643 649 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 EARS2Q5JPH6 523 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 PIGOQ8TEQ8 1089 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 PDCD6IPQ8WUM4 868 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 CLMNQ96JQ2 1002 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 RPGRIP1Q96KN7 1286 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 SPON2Q9BUD6 331 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 NGRNQ9NPE2 291 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 H3BQF6 201 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 CYBBP04839 570 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 PLA2G4BP0C869 781 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 PPARGP37231 505 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 FKBP3Q00688 224 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 SF3A3Q12874 501 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 VGLL4Q14135 290 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 DNAJC24Q6P3W2 148 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 TACO1Q9BSH4 297 aaKnown RBP9.21□□□□□ -0.94
CLIP1-218ENST00000545889 RNF208Q9H0X6 261 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.94
CLIP1-218ENST00000545889 GLTPD2A6NH11 291 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 LRRN2O75325 713 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 ST8SIA6P61647 398 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 CDC42EP1Q00587 391 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 PSMD6Q15008 389 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SHC4Q6S5L8 630 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 ANKS4BQ8N8V4 417 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 OPTNQ96CV9 577 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 KRT12Q99456 494 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 MAP3K14Q99558 947 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 CALN1Q9BXU9 219 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 STAG3L1P0CL83 205 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 GCLCP48506 637 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SNCBQ16143 134 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 MFSD4BQ5TF39 518 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 RFX6Q8HWS3 928 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 DCLK2Q8N568 766 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 OR8K1Q8NGG5 319 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SCYL1Q96KG9 808 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SH2D3AQ9BRG2 576 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SPEF2Q9C093 1822 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 CCDC151A5D8V7 595 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 KCNJ18B7U540 433 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 FOXN1O15353 648 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 MOCS3O95396 460 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 PTPRAP18433 802 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 ARHGAP25P42331 645 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 QARSP47897 775 aaKnown RBP9.2□□□□□ -0.94
CLIP1-218ENST00000545889 RWDD2BP57060 319 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 KCNJ12Q14500 433 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 PTPN21Q16825 1174 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 DEFB115Q30KQ5 88 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 HHATQ5VTY9 493 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 SLC30A10Q6XR72 485 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 GLYCTKQ8IVS8 523 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 FBXL16Q8N461 479 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 RABGGTAQ92696 567 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 ETAA1Q9NY74 926 aa9.2□□□□□ -0.94
CLIP1-218ENST00000545889 IPO5O00410 1097 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms