RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GJB4Q9NTQ9 266 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 USTQ9Y2C2 406 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 KIAA1841Q6NSI8 718 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 SLFN12Q8IYM2 578 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 ABI1Q8IZP0 508 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 RIN2Q8WYP3 895 aaPredicted RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 ACSF2Q96CM8 615 aaPredicted RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 CASD1Q96PB1 797 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 GCOM2Q9BZD3 368 aaPredicted RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
DDX55-212ENST00000544738 VAV3Q9UKW4 847 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
DDX55-212ENST00000544738 EML1O00423 815 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 MAFO75444 373 aaPredicted RBP18.13■□□□□ 0.49
DDX55-212ENST00000544738 RFX1P22670 979 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 TRIM29Q14134 588 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
DDX55-212ENST00000544738 TMC5Q6UXY8 1006 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 ANO5Q75V66 913 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 DCLK2Q8N568 766 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 HAS1Q92839 578 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 DACT1Q9NYF0 836 aa18.13■□□□□ 0.49
DDX55-212ENST00000544738 DTNBO60941 627 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 LARGE1O95461 756 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 EPCAMP16422 314 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 NR5A1Q13285 461 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 EPHA7Q15375 998 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 ZNF410Q86VK4 478 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 RNF169Q8NCN4 708 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 NSUN7Q8NE18 718 aaKnown RBP18.12■□□□□ 0.49
DDX55-212ENST00000544738 SLC7A3Q8WY07 619 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 ZNF668Q96K58 619 aaPredicted RBP18.12■□□□□ 0.49
DDX55-212ENST00000544738 CHST12Q9NRB3 414 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
DDX55-212ENST00000544738 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
DDX55-212ENST00000544738 KMT2BQ9UMN6 2715 aaPredicted RBP18.12■□□□□ 0.49
DDX55-212ENST00000544738 A0A0U1RQF3 1178 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 TMEM150BA6NC51 233 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDX55-212ENST00000544738 DRP2Q13474 957 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 RSPO4Q2I0M5 234 aaPredicted RBP18.11■□□□□ 0.49
DDX55-212ENST00000544738 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
DDX55-212ENST00000544738 OTUD6AQ7L8S5 288 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 OTOP3Q7RTS5 596 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 ECHDC2Q86YB7 292 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 FEZF2Q8TBJ5 459 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 TNFRSF25Q93038 417 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 SH2D3AQ9BRG2 576 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 KCNK12Q9HB15 430 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 DLL3Q9NYJ7 618 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 DUSP12Q9UNI6 340 aa18.11■□□□□ 0.49
DDX55-212ENST00000544738 A0A087WZ62 844 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.1■□□□□ 0.49
DDX55-212ENST00000544738 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 SEC24BO95487 1268 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 NCAPH2Q6IBW4 605 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 CABP7Q86V35 215 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 RHPN2Q8IUC4 686 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 SLC39A11Q8N1S5 342 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 RSPH1Q8WYR4 309 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 RUBCNQ92622 972 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
DDX55-212ENST00000544738 RNF19AQ9NV58 838 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 OTOGLQ3ZCN5 2332 aa18.1■□□□□ 0.49
DDX55-212ENST00000544738 BTBD18B2RXH4 712 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 NARSO43776 548 aaKnown RBP18.09■□□□□ 0.49
DDX55-212ENST00000544738 GAS2O43903 313 aaKnown RBP18.09■□□□□ 0.49
DDX55-212ENST00000544738 CFHP08603 1231 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 RFC5P40937 340 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 ALDH7A1P49419 539 aaKnown RBP18.09■□□□□ 0.49
DDX55-212ENST00000544738 POLGP54098 1239 aaPredicted RBP18.09■□□□□ 0.49
DDX55-212ENST00000544738 NPEPPSP55786 919 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 PLA2G4FQ68DD2 849 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
DDX55-212ENST00000544738 VPS52Q8N1B4 723 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 LXNQ9BS40 222 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 TRAIPQ9BWF2 469 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 ZSWIM4Q9H7M6 989 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
DDX55-212ENST00000544738 FAM205CA6NFA0 338 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 JAK2O60674 1132 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 CSDE1O75534 798 aaKnown RBP18.08■□□□□ 0.48
DDX55-212ENST00000544738 SKIP12755 728 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 FGFR4P22455 802 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
DDX55-212ENST00000544738 SPIRE1Q08AE8 756 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 CALCRLQ16602 461 aa18.08■□□□□ 0.48
DDX55-212ENST00000544738 ZC3H14Q6PJT7 736 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms