RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
C1RL-209ENST00000543941 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
C1RL-209ENST00000543941 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
C1RL-209ENST00000543941 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
C1RL-209ENST00000543941 HES2Q9Y543 173 aa12.7□□□□□ -0.38
C1RL-209ENST00000543941 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
C1RL-209ENST00000543941 TDRD15B5MCY1 1934 aaKnown RBP12.69□□□□□ -0.38
C1RL-209ENST00000543941 TSPAN1O60635 241 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 LILRB3O75022 631 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 MED24O75448 989 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 CXCL14O95715 111 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 EDN1P05305 212 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 EPCAMP16422 314 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 XBP1P17861 261 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 GLRA2P23416 452 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 SP100P23497 879 aaPredicted RBP12.69□□□□□ -0.38
C1RL-209ENST00000543941 RFC5P40937 340 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 MCM2P49736 904 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 RARRES1P49788 294 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 CAPSQ13938 189 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
C1RL-209ENST00000543941 CCDC83Q8IWF9 413 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 GSTCDQ8NEC7 633 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 SLC22A17Q8WUG5 538 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 PSPC1Q8WXF1 523 aaKnown RBP12.69□□□□□ -0.38
C1RL-209ENST00000543941 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 PPP2R3CQ969Q6 453 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 INO80BQ9C086 356 aaPredicted RBP12.69□□□□□ -0.38
C1RL-209ENST00000543941 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 POLD4Q9HCU8 107 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 GPRC5CQ9NQ84 441 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 PCDHA12Q9UN75 941 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 USP20Q9Y2K6 914 aa12.69□□□□□ -0.38
C1RL-209ENST00000543941 DENND4AQ7Z401 1863 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 B4GALT5O43286 388 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 POMCP01189 267 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 PPM1AP35813 382 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 MBTD1Q05BQ5 628 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 NBR1Q14596 966 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 CALCRLQ16602 461 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 ECM1Q16610 540 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 DDX53Q86TM3 631 aaKnown RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 SLFN12Q8IYM2 578 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 BSNDQ8WZ55 320 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 WASF1Q92558 559 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 EDAQ92838 391 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 FAM122AQ96E09 287 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 MTRQ99707 1265 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 MRPL9Q9BYD2 267 aaKnown RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 POMKQ9H5K3 350 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 CACNG4Q9UBN1 327 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
C1RL-209ENST00000543941 IPPQ9Y573 584 aa12.68□□□□□ -0.38
C1RL-209ENST00000543941 NRP1O14786 923 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 NEMFO60524 1076 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 CTSAP10619 480 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 MCM7P33993 719 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 ZXDAP98168 799 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 KRT17Q04695 432 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ZNF174Q15697 407 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 IER5LQ5T953 404 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 CATSPER3Q86XQ3 398 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 COLGALT2Q8IYK4 626 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ZFP42Q96MM3 310 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 RSAD1Q9HA92 442 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ANKEF1Q9NU02 776 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
C1RL-209ENST00000543941 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
C1RL-209ENST00000543941 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 INPPL1O15357 1258 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 ASAP2O43150 1006 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 MARCH6O60337 910 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.38
C1RL-209ENST00000543941 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
C1RL-209ENST00000543941 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
C1RL-209ENST00000543941 TOB1P50616 345 aaPredicted RBP12.66□□□□□ -0.38
C1RL-209ENST00000543941 RAB27AP51159 221 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
C1RL-209ENST00000543941 TRIM67Q6ZTA4 783 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms