RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 MYL5Q02045 173 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 MBTD1Q05BQ5 628 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 IQCB1Q15051 598 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 NFIL3Q16649 462 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 MAPK6Q16659 721 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 TRIM71Q2Q1W2 868 aaKnown RBP17.6■□□□□ 0.41
TRIM65-204ENST00000543309 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 TTI2Q6NXR4 508 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 GAS2L3Q86XJ1 694 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 PRIMPOLQ96LW4 560 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 SCLT1Q96NL6 688 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 TSG101Q99816 390 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 FDXACB1Q9BRP7 624 aaPredicted RBP17.6■□□□□ 0.41
TRIM65-204ENST00000543309 GCOM2Q9BZD3 368 aaPredicted RBP17.6■□□□□ 0.41
TRIM65-204ENST00000543309 GBP3Q9H0R5 595 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 FZD8Q9H461 694 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 CBX8Q9HC52 389 aa17.6■□□□□ 0.41
TRIM65-204ENST00000543309 TLR3O15455 904 aaKnown RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 DARSP14868 501 aaKnown RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 KCNA1Q09470 495 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 KIZQ2M2Z5 673 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 FAM26DQ5JW98 314 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 DHX40Q8IX18 779 aaKnown RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 NELFCDQ8IXH7 590 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 CCDC155Q8N6L0 562 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 CAGE1Q8TC20 777 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 DHX38Q92620 1227 aaKnown RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 MED15Q96RN5 788 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 CELF4Q9BZC1 486 aaKnown RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 PRMT7Q9NVM4 692 aaPredicted RBP17.59■□□□□ 0.41
TRIM65-204ENST00000543309 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
TRIM65-204ENST00000543309 COL6A3P12111 3177 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 ACKR2O00590 384 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 TGFB1I1O43294 461 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.4
TRIM65-204ENST00000543309 PRKCBP05771 671 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 EIF4BP23588 611 aaKnown RBP17.58■□□□□ 0.4
TRIM65-204ENST00000543309 MYBPC2Q14324 1141 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 SPATA1Q5VX52 437 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 ANKRD40Q6AI12 368 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 ZPBP2Q6X784 338 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 C12orf56Q8IXR9 622 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 ZC3H3Q8IXZ2 948 aaKnown RBP17.58■□□□□ 0.4
TRIM65-204ENST00000543309 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 WNT8BQ93098 351 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 SQORQ9Y6N5 450 aa17.58■□□□□ 0.4
TRIM65-204ENST00000543309 CNTNAP2Q9UHC6 1331 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 BECN2A8MW95 431 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 INO80B-WBP1J3KQ70 363 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 SFPQP23246 707 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 THPOP40225 353 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 PMS1P54277 932 aaKnown RBP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 MGAT3Q09327 533 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 NCAPHQ15003 741 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 SLC9A9Q8IVB4 645 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 C7orf61Q8IZ16 206 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 AOPEPQ8N6M6 819 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 NOC3LQ8WTT2 800 aaKnown RBP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 MRPL4Q9BYD3 311 aaKnown RBP17.57■□□□□ 0.4
TRIM65-204ENST00000543309 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 CDY2AQ9Y6F7 541 aa17.57■□□□□ 0.4
TRIM65-204ENST00000543309 TRIM49BA6NDI0 452 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 CHRNA1P02708 482 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 RPL13P26373 211 aaKnown RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 STX17P56962 302 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 BFSP2Q13515 415 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 AMHR2Q16671 573 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 FAM43BQ6ZT52 329 aaPredicted RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 BICD1Q96G01 975 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 CEP63Q96MT8 703 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 PPP1R16BQ96T49 567 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 OSMRQ99650 979 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 DUSP9Q99956 384 aaKnown RBP17.56■□□□□ 0.4
TRIM65-204ENST00000543309 GDF15Q99988 308 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 CDHR5Q9HBB8 845 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 AGPAT3Q9NRZ7 376 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 NFE2L3Q9Y4A8 694 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 STYXL1Q9Y6J8 313 aa17.56■□□□□ 0.4
TRIM65-204ENST00000543309 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
TRIM65-204ENST00000543309 PQBP1O60828 265 aaKnown RBP17.55■□□□□ 0.4
TRIM65-204ENST00000543309 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 CKBP12277 381 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 GARTP22102 1010 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 AXLP30530 894 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 LIG4P49917 911 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 ATN1P54259 1190 aaPredicted RBP17.55■□□□□ 0.4
TRIM65-204ENST00000543309 TPM4P67936 248 aa17.55■□□□□ 0.4
TRIM65-204ENST00000543309 PRPF4BQ13523 1007 aaKnown RBP17.55■□□□□ 0.4
TRIM65-204ENST00000543309 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms