RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 SRGAP2CP0DJJ0 459 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 SP100P23497 879 aaPredicted RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 YWHABP31946 246 aaKnown RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 SLC11A1P49279 550 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 NUBP1P53384 320 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 LAMTOR4Q0VGL1 99 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 SCRN1Q12765 414 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 TCF15Q12870 199 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 RARS2Q5T160 578 aaKnown RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 ZNF280BQ86YH2 543 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 TMEM143Q96AN5 459 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 IRF2BPLQ9H1B7 796 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 WRAP73Q9P2S5 460 aaPredicted RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 CDH22Q9UJ99 828 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 SORCS3Q9UPU3 1222 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 USTQ9Y2C2 406 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 PFKFB2O60825 505 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 EPCAMP16422 314 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
PTPN6-219ENST00000542848 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPN6-219ENST00000542848 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 C12orf76Q8N812 135 aaPredicted RBP13.24□□□□□ -0.29
PTPN6-219ENST00000542848 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 FAM193BQ96PV7 902 aaPredicted RBP13.24□□□□□ -0.29
PTPN6-219ENST00000542848 LXNQ9BS40 222 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 VN1R3Q9BXE9 311 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 EMILIN2Q9BXX0 1053 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 ZSWIM4Q9H7M6 989 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
PTPN6-219ENST00000542848 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 B4GALT3O60512 393 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 LILRB3O75022 631 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 DDHD2O94830 711 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 WEE2P0C1S8 567 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
PTPN6-219ENST00000542848 AXLP30530 894 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 SPIRE1Q08AE8 756 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
PTPN6-219ENST00000542848 EMC2Q15006 297 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 UBXN11Q5T124 520 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 CABP7Q86V35 215 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
PTPN6-219ENST00000542848 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 WASF1Q92558 559 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 KLHL5Q96PQ7 755 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 MTRQ99707 1265 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 RGL1Q9NZL6 768 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 DBR1Q9UK59 544 aaKnown RBP13.23□□□□□ -0.29
PTPN6-219ENST00000542848 TPCN1Q9ULQ1 816 aa13.23□□□□□ -0.29
PTPN6-219ENST00000542848 ZFHX2Q9C0A1 2572 aaPredicted RBP13.23□□□□□ -0.29
PTPN6-219ENST00000542848 NRP1O14786 923 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 SLITRK3O94933 977 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 BRD1O95696 1058 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 ITGA4P13612 1032 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 KLRC2P26717 231 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 CLCN4P51793 760 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 PTENP60484 403 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 NCBP1Q09161 790 aaKnown RBP13.22□□□□□ -0.29
PTPN6-219ENST00000542848 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 KANK3Q6NY19 840 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 GPR149Q86SP6 731 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 CCDC51Q96ER9 411 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 SFXN1Q9H9B4 322 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
PTPN6-219ENST00000542848 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
PTPN6-219ENST00000542848 LIMD1Q9UGP4 676 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 CFAP54Q96N23 3096 aa13.22□□□□□ -0.29
PTPN6-219ENST00000542848 ZBTB39O15060 712 aa13.21□□□□□ -0.29
PTPN6-219ENST00000542848 INPPL1O15357 1258 aa13.21□□□□□ -0.29
PTPN6-219ENST00000542848 ERLIN2O94905 339 aa13.21□□□□□ -0.29
PTPN6-219ENST00000542848 LYPLA2O95372 231 aa13.21□□□□□ -0.29
PTPN6-219ENST00000542848 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms