RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 DYDC2Q96IM9 177 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 PRRX2Q99811 253 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 ADAM7Q9H2U9 754 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 IRAK3Q9Y616 596 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 MARCH6O60337 910 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 LARGE1O95461 756 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 CXCL14O95715 111 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 SRGAP2CP0DJJ0 459 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 KRT2P35908 639 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 SLC11A1P49279 550 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 CYP4A11Q02928 519 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 RNASELQ05823 741 aaKnown RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 ITIH3Q06033 890 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 SIGLEC14Q08ET2 396 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 CTTNQ14247 550 aaKnown RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 CES5AQ6NT32 575 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 AGMOQ6ZNB7 445 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
VAMP1-206ENST00000538970 ZNF280BQ86YH2 543 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 AUTS2Q8WXX7 1259 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 NECTIN4Q96NY8 510 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 VN1R3Q9BXE9 311 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 ZSWIM4Q9H7M6 989 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 RSAD1Q9HA92 442 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
VAMP1-206ENST00000538970 CNTNAP2Q9UHC6 1331 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 ZBTB39O15060 712 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
VAMP1-206ENST00000538970 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
VAMP1-206ENST00000538970 GIT2Q14161 759 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 ME3Q16798 604 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 XKR9Q5GH70 373 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 NECAB1Q8N987 351 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 RNF149Q8NC42 400 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 URGCPQ8TCY9 931 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 ASIC4Q96FT7 647 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 MTRQ99707 1265 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 GBP3Q9H0R5 595 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 POMKQ9H5K3 350 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 XPNPEP1Q9NQW7 623 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 DZANK1Q9NVP4 752 aa13.96□□□□□ -0.17
VAMP1-206ENST00000538970 ASAP2O43150 1006 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 DDHD2O94830 711 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 SLITRK3O94933 977 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 LYPLA2O95372 231 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 NEFLP07196 543 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 EPCAMP16422 314 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
VAMP1-206ENST00000538970 PTPN14Q15678 1187 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
VAMP1-206ENST00000538970 NSUN7Q8NE18 718 aaKnown RBP13.95□□□□□ -0.18
VAMP1-206ENST00000538970 SLC22A17Q8WUG5 538 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
VAMP1-206ENST00000538970 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
VAMP1-206ENST00000538970 C2CD4DB7Z1M9 353 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 WNT7AO00755 349 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 TSPAN1O60635 241 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 ERLIN2O94905 339 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 AVPR2P30518 371 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 MTHFRP42898 656 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
VAMP1-206ENST00000538970 CALCRLQ16602 461 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 RARS2Q5T160 578 aaKnown RBP13.94□□□□□ -0.18
VAMP1-206ENST00000538970 KIAA1841Q6NSI8 718 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
VAMP1-206ENST00000538970 TPH2Q8IWU9 490 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 C12orf76Q8N812 135 aaPredicted RBP13.94□□□□□ -0.18
VAMP1-206ENST00000538970 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 RIPOR3Q96MK2 946 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 HSD17B14Q9BPX1 270 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 TMEM175Q9BSA9 504 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
VAMP1-206ENST00000538970 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 PRR23AA6NEV1 266 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 PROB1E7EW31 1015 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 INPPL1O15357 1258 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 JAK2O60674 1132 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 DGAT1O75907 488 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 PDGFBP01127 241 aaPredicted RBP13.93□□□□□ -0.18
VAMP1-206ENST00000538970 POMCP01189 267 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 AXLP30530 894 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 PTENP60484 403 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms