RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 EARS2Q5JPH6 523 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 CES5AQ6NT32 575 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 LLGL2Q6P1M3 1020 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 TRIM67Q6ZTA4 783 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 VPS52Q8N1B4 723 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 RNF149Q8NC42 400 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 LPPQ93052 612 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 TMEM143Q96AN5 459 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 DYDC2Q96IM9 177 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 RIPOR3Q96MK2 946 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 PRRX2Q99811 253 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 EIF2AK1Q9BQI3 630 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 NRDE2Q9H7Z3 1164 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 RGL1Q9NZL6 768 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 INPP5FQ9Y2H2 1132 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 MTCL1Q9Y4B5 1905 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 CACNA1HO95180 2353 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 NT5C1B-RDH14C9J2C7 533 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 M0R296 226 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 INPPL1O15357 1258 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 DGAT1O75907 488 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 LARGE1O95461 756 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 HOXA11P31270 313 aaPredicted RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 CA8P35219 290 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 SLC11A1P49279 550 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 NCBP1Q09161 790 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 ORC2Q13416 577 aaPredicted RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 ME3Q16798 604 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 UBXN11Q5T124 520 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 KIAA1841Q6NSI8 718 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 TMEM173Q86WV6 379 aaPredicted RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 SUGP1Q8IWZ8 645 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 DIS3L2Q8IYB7 885 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 HACE1Q8IYU2 909 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 ADAM7Q9H2U9 754 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 MINDY3Q9H8M7 445 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 XPNPEP1Q9NQW7 623 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
DDB1-212ENST00000538470 PCDHA12Q9UN75 941 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 MYO10Q9HD67 2058 aa9.63□□□□□ -0.87
DDB1-212ENST00000538470 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 TSPAN1O60635 241 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 SLITRK3O94933 977 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 CXCL14O95715 111 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 SRGAP2CP0DJJ0 459 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 XRCC6P12956 609 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDB1-212ENST00000538470 RARRES1P49788 294 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 PTENP60484 403 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 CAPSQ13938 189 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 PTPN14Q15678 1187 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 TPH2Q8IWU9 490 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 BCL7CQ8WUZ0 217 aaPredicted RBP9.62□□□□□ -0.87
DDB1-212ENST00000538470 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 FAM193BQ96PV7 902 aaPredicted RBP9.62□□□□□ -0.87
DDB1-212ENST00000538470 HSD17B14Q9BPX1 270 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 HERC2P3Q9BVR0 1158 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 GBP3Q9H0R5 595 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
DDB1-212ENST00000538470 SFXN1Q9H9B4 322 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 DNAJB4Q9UDY4 337 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
DDB1-212ENST00000538470 SSX2IPQ9Y2D8 614 aa9.62□□□□□ -0.87
DDB1-212ENST00000538470 BTBD18B2RXH4 712 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 INO80B-WBP1J3KQ70 363 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 B4GALT3O60512 393 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 JAK2O60674 1132 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 SOD2P04179 222 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 URODP06132 367 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 ITGA4P13612 1032 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 ARL2P36404 184 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 NEK4P51957 841 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 NHLH1Q02575 133 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 MBTD1Q05BQ5 628 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 SAFBQ15424 915 aaKnown RBP eCLIP9.61□□□□□ -0.87
DDB1-212ENST00000538470 AMHR2Q16671 573 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 LONRF3Q496Y0 759 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 CABP7Q86V35 215 aa9.61□□□□□ -0.87
DDB1-212ENST00000538470 FBXL6Q8N531 539 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms