RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TRIM29Q14134 588 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 CALCRLQ16602 461 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 ME3Q16798 604 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 AGMOQ6ZNB7 445 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 DDX53Q86TM3 631 aaKnown RBP10.8□□□□□ -0.68
CHD4-207ENST00000537634 FERMT3Q86UX7 667 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 SUGP1Q8IWZ8 645 aaKnown RBP10.8□□□□□ -0.68
CHD4-207ENST00000537634 AUTS2Q8WXX7 1259 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 PBXIP1Q96AQ6 731 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 FBXL18Q96ME1 805 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 NECTIN4Q96NY8 510 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 FAM193BQ96PV7 902 aaPredicted RBP10.8□□□□□ -0.68
CHD4-207ENST00000537634 MINDY3Q9H8M7 445 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 TSHZ2Q9NRE2 1034 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 DNAJB4Q9UDY4 337 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 PCDHA12Q9UN75 941 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 NR2E1Q9Y466 385 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 NEMFO60524 1076 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 LARGE1O95461 756 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 HOXA11P31270 313 aaPredicted RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 MTHFRP42898 656 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 SLC11A1P49279 550 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 FOSBP53539 338 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 SIGLEC14Q08ET2 396 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 NCBP1Q09161 790 aaKnown RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 TFDP1Q14186 410 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 MXD4Q14582 209 aaPredicted RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 PCBP1Q15365 356 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHD4-207ENST00000537634 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 BMP8AQ7Z5Y6 402 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 CNNM3Q8NE01 707 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 NSUN7Q8NE18 718 aaKnown RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 BCL7CQ8WUZ0 217 aaPredicted RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 TNFRSF25Q93038 417 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 RIPOR3Q96MK2 946 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 ADAM7Q9H2U9 754 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 TTC12Q9H892 705 aaPredicted RBP10.79□□□□□ -0.68
CHD4-207ENST00000537634 KANSL3Q9P2N6 904 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 STK39Q9UEW8 545 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 CDH22Q9UJ99 828 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 IRAK3Q9Y616 596 aa10.79□□□□□ -0.68
CHD4-207ENST00000537634 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 BTBD18B2RXH4 712 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 INO80B-WBP1J3KQ70 363 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 ZBTB39O15060 712 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 DGAT1O75907 488 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 SLITRK3O94933 977 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 LYPLA2O95372 231 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 ITGA4P13612 1032 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 EPCAMP16422 314 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
CHD4-207ENST00000537634 NEK4P51957 841 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 NHLH1Q02575 133 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 RARS2Q5T160 578 aaKnown RBP10.78□□□□□ -0.68
CHD4-207ENST00000537634 NOTUMQ6P988 496 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 MRPL10Q7Z7H8 261 aaKnown RBP10.78□□□□□ -0.68
CHD4-207ENST00000537634 PPFIBP1Q86W92 1011 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 ZNF280BQ86YH2 543 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
CHD4-207ENST00000537634 CCDC51Q96ER9 411 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 TMEM175Q9BSA9 504 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 POMKQ9H5K3 350 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 UBN1Q9NPG3 1134 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 ANKEF1Q9NU02 776 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 FAN1Q9Y2M0 1017 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 IPPQ9Y573 584 aa10.78□□□□□ -0.68
CHD4-207ENST00000537634 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 B4GALT3O60512 393 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 TSPAN1O60635 241 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 JAK2O60674 1132 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 DDHD2O94830 711 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 POMCP01189 267 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 ALDH2P05091 517 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 SSBP05455 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHD4-207ENST00000537634 WEE2P0C1S8 567 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 AXLP30530 894 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 TXKP42681 527 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 PTENP60484 403 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 ATAT1Q5SQI0 421 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 KIAA1841Q6NSI8 718 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 CABP7Q86V35 215 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 ALYREFQ86V81 257 aaKnown RBP10.77□□□□□ -0.69
CHD4-207ENST00000537634 HACE1Q8IYU2 909 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 FBXL6Q8N531 539 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
CHD4-207ENST00000537634 TDRD5Q8NAT2 981 aaKnown RBP10.77□□□□□ -0.69
CHD4-207ENST00000537634 CPB2Q96IY4 423 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 HSD17B14Q9BPX1 270 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 EMILIN2Q9BXX0 1053 aa10.77□□□□□ -0.69
CHD4-207ENST00000537634 EIF2AQ9BY44 585 aaKnown RBP10.77□□□□□ -0.69
CHD4-207ENST00000537634 TRIM6Q9C030 488 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms