RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 KCNQ1P51787 676 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 NAPAP54920 295 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 NPEPPSP55786 919 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 RTP1P59025 263 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 POLR2FP61218 127 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ELF3P78545 371 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 BYSLQ13895 437 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ADGRE1Q14246 886 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 PDIA5Q14554 519 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 UAP1Q16222 522 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ERMARDQ5T6L9 678 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 LRCH2Q5VUJ6 765 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 KRT79Q5XKE5 535 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 DCAF15Q66K64 600 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 TLDC1Q6P9B6 456 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 C15orf52Q6ZUT6 534 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 PRRT2Q7Z6L0 340 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ADGRA1Q86SQ6 560 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 RASGEF1CQ8N431 466 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 GBP7Q8N8V2 638 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 RASGRP4Q8TDF6 673 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 RAD54LQ92698 747 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CUL5Q93034 780 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 MAGOHBQ96A72 148 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 TLCD1Q96CP7 247 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ANKRD27Q96NW4 1050 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 NAP1L4Q99733 375 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 TRIM6Q9C030 488 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 PRDM12Q9H4Q4 367 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF287Q9HBT7 754 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 NLRC4Q9NPP4 1024 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 SUCLA2Q9P2R7 463 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 RASAL2Q9UJF2 1139 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF112Q9UJU3 913 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 FBXL5Q9UKA1 691 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 TTC7AQ9ULT0 858 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ATP11BQ9Y2G3 1177 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ZHX2Q9Y6X8 837 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 TRIOO75962 3097 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 DMDP11532 3685 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PLXNA1Q9UIW2 1896 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PHIPQ8WWQ0 1821 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 KDM3AQ9Y4C1 1321 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 MYMKA6NI61 221 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 F8VZ95 297 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PEX10O60683 326 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PPFIA2O75334 1257 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 NUDT17P0C025 328 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PDHBP11177 359 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 ECHS1P30084 290 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 TECP42680 631 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF131P52739 623 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 TFAP4Q01664 338 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 GRB10Q13322 594 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 NAA25Q14CX7 972 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 CALCRLQ16602 461 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 LETM2Q2VYF4 491 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 FAM47AQ5JRC9 791 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 TREML2Q5T2D2 321 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 FASTKD5Q7L8L6 764 aaKnown RBP8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PEX26Q7Z412 305 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 TMC3Q7Z5M5 1100 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 FAM83AQ86UY5 434 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 CCDC65Q8IXS2 484 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 SEC14L1Q92503 715 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 PGM2Q96G03 612 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 IFT74Q96LB3 600 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 CCDC134Q9H6E4 229 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 NOD2Q9HC29 1040 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 DCP1AQ9NPI6 582 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-216ENST00000536548 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-216ENST00000536548 SEC63Q9UGP8 760 aaKnown RBP8.41□□□□□ -1.06
CPSF7-216ENST00000536548 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
CPSF7-216ENST00000536548 ZFHX4Q86UP3 3567 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 RLFQ13129 1914 aa8.41□□□□□ -1.06
CPSF7-216ENST00000536548 ROBO3Q96MS0 1386 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 A0A087X0T9 212 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 TRIM43BA6NCK2 446 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SMCO2A6NFE2 343 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 LIN7AO14910 233 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 CTNND1O60716 968 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 NOL4O94818 638 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 LUC7L3O95232 432 aaKnown RBP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 AGTP01019 485 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SSBP05455 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPSF7-216ENST00000536548 H2AFZP0C0S5 128 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 FAM228BP0C875 321 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SLURP2P0DP57 97 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 SCP2P22307 547 aa8.4□□□□□ -1.06
CPSF7-216ENST00000536548 IGFBP4P22692 258 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms