RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 GRXCR1A8MXD5 290 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 HSF2BPO75031 334 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 CCL23P55773 120 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 RWDD2BP57060 319 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 FOXR2Q6PJQ5 311 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 DNERQ8NFT8 737 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 SYTL5Q8TDW5 730 aaPredicted RBP12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 CAVIN3Q969G5 261 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 C7orf25Q9BPX7 421 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
CHRNB1-202ENST00000536404 B4DLN1 442 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 ENC1O14682 589 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 KLRC4O43908 158 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 NEBLO76041 1014 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 ARIH2O95376 493 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 LCA5LO95447 670 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 ABL1P00519 1130 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 GGCXP38435 758 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 PREPLQ4J6C6 727 aaPredicted RBP12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 RASIP1Q5U651 963 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 MICALCLQ6ZW33 695 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 FBXO11Q86XK2 927 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 CAPS2Q9BXY5 557 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 IL23AQ9NPF7 189 aa12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 TRMT13Q9NUP7 481 aaKnown RBP12.64□□□□□ -0.39
CHRNB1-202ENST00000536404 TXNP10599 105 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 CYP2C9P11712 490 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 DNAJB2P25686 324 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 PBX2P40425 430 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 CPT1AP50416 773 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 SKOR1P84550 965 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 IL17AQ16552 155 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 CNOT6LQ96LI5 555 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 MPHOSPH6Q99547 160 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 SH3GL2Q99962 352 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 SEZ6LQ9BYH1 1024 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 WNT8AQ9H1J5 351 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 TRIM10Q9UDY6 481 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 PLAGL2Q9UPG8 496 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 CHD9Q3L8U1 2897 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
CHRNB1-202ENST00000536404 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 WNT7AO00755 349 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 FGBP02675 491 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 IRAK1P51617 712 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 GRIN2CQ14957 1233 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SLC35G1Q2M3R5 365 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 CABP7Q86V35 215 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 IFT20Q8IY31 132 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 C1orf131Q8NDD1 294 aaKnown RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 ARMC2Q8NEN0 867 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 VWCEQ96DN2 955 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 PVALEFA0A1B0GWK0 134 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 TRIM49BA6NDI0 452 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 EIF3HO15372 352 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 PJA2O43164 708 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SCP2P22307 547 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 GRM4Q14833 912 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 LY6KQ17RY6 165 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 NAALADL2Q58DX5 795 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 MCF2L2Q86YR7 1114 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 TIFAQ96CG3 184 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 SCLYQ96I15 445 aa12.62□□□□□ -0.39
CHRNB1-202ENST00000536404 RMDN3Q96TC7 470 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms