RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CLEC11AQ9Y240 323 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 PCDHB13Q9Y5F0 798 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 A0A1W2PQC6 194 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 TISP43B9A030 160 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 BCRP11274 1271 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 TLR10Q9BXR5 811 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 PARVGQ9HBI0 331 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 HYOU1Q9Y4L1 999 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 PCDHA13Q9Y5I0 950 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 ASTN1O14525 1302 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 MYH11P35749 1972 aa23.18■■□□□ 1.3
TRIM3-214ENST00000536344 P4HBP07237 508 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 PEX19P40855 299 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 IREB2P48200 963 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 DAW1Q8N136 415 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 ARHGAP20Q9P2F6 1191 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 A0A1B0GUA9 196 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 SPA17Q15506 151 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 ENOX2Q16206 610 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 DCAF17Q5H9S7 520 aaPredicted RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 WDR78Q5VTH9 848 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 FAM178BQ8IXR5 827 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 NSUN6Q8TEA1 469 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 STAMBPL1Q96FJ0 436 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 SEC16BQ96JE7 1060 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 BCCIPQ9P287 314 aaKnown RBP eCLIP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 BAIAP2L1Q9UHR4 511 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 GMNCA6NCL1 334 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 TMCO5BA8MYB1 307 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 CCND2P30279 289 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 QARSP47897 775 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 GHRHRQ02643 423 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 ITIH3Q06033 890 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 TCERG1LQ5VWI1 586 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 SEPT14Q6ZU15 432 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 EPM2AIP1Q7L775 607 aaPredicted RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 FMNL3Q8IVF7 1028 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 RDH13Q8NBN7 331 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 GDF3Q9NR23 364 aa23.17■■□□□ 1.3
TRIM3-214ENST00000536344 CNOT8Q9UFF9 292 aaKnown RBP23.17■■□□□ 1.3
TRIM3-214ENST00000536344 OTOFQ9HC10 1997 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 AKAP3O75969 853 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 FGFR1OPO95684 399 aaKnown RBP23.16■■□□□ 1.3
TRIM3-214ENST00000536344 PAFAH1B1P43034 410 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 NLRX1Q86UT6 975 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 IFT20Q8IY31 132 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 CCDC170Q8IYT3 715 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 STK24Q9Y6E0 443 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 DCDC2CA8MYV0 355 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 YWHABP31946 246 aaKnown RBP23.16■■□□□ 1.3
TRIM3-214ENST00000536344 EMC10Q5UCC4 262 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 MAP1SQ66K74 1059 aaPredicted RBP23.16■■□□□ 1.3
TRIM3-214ENST00000536344 KRT12Q99456 494 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 ATP6V0A4Q9HBG4 840 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 SIK3Q9Y2K2 1263 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 L3MBTL1Q9Y468 752 aa23.16■■□□□ 1.3
TRIM3-214ENST00000536344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRIM3-214ENST00000536344 CETN3O15182 167 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 ZBED6P86452 979 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 SP2Q02086 613 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 KCNMA1Q12791 1236 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 ACTR5Q9H9F9 607 aaPredicted RBP23.15■■□□□ 1.3
TRIM3-214ENST00000536344 KIF9Q9HAQ2 790 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 LRRC4CQ9HCJ2 640 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 PACSIN2Q9UNF0 486 aaPredicted RBP23.15■■□□□ 1.3
TRIM3-214ENST00000536344 PTPRFP10586 1907 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 FAM170AA1A519 330 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 PGK2P07205 417 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 RARRES1P49788 294 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 CYP2J2P51589 502 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 C11orf91Q3C1V1 193 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 RBM46Q8TBY0 533 aaKnown RBP23.15■■□□□ 1.3
TRIM3-214ENST00000536344 ZNF483Q8TF39 744 aaPredicted RBP23.15■■□□□ 1.3
TRIM3-214ENST00000536344 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 KIFC3Q9BVG8 833 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 TXNRD2Q9NNW7 524 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 TBC1D22BQ9NU19 505 aa23.15■■□□□ 1.3
TRIM3-214ENST00000536344 TGFB1I1O43294 461 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 SLC26A4O43511 780 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 NR3C1P04150 777 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 FDX1P10109 184 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 TCP1P17987 556 aaKnown RBP23.14■■□□□ 1.3
TRIM3-214ENST00000536344 MYO1EQ12965 1108 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 MAPK7Q13164 816 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 XKR9Q5GH70 373 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 RRAGAQ7L523 313 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 ERGIC2Q96RQ1 377 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 FIZ1Q96SL8 496 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 GABBR1Q9UBS5 961 aa23.14■■□□□ 1.3
TRIM3-214ENST00000536344 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 TNFRSF8P28908 595 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 GCKP35557 465 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 ARID5AQ03989 594 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 SH3D19Q5HYK7 790 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 HIBCHQ6NVY1 386 aaPredicted RBP23.14■■□□□ 1.29
TRIM3-214ENST00000536344 ASCC2Q9H1I8 757 aaPredicted RBP23.14■■□□□ 1.29
TRIM3-214ENST00000536344 SLC12A6Q9UHW9 1150 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 WDR90Q96KV7 1748 aa23.14■■□□□ 1.29
TRIM3-214ENST00000536344 TRAPPC3O43617 180 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms