RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SEMA4AQ9H3S1 761 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 DEF6Q9H4E7 631 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 BCAS3Q9H6U6 928 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 TMOD2Q9NZR1 351 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 DDX20Q9UHI6 824 aaKnown RBP5.06□□□□□ -1.6
YBX3-205ENST00000536107 FBXL21Q9UKT6 434 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 TESMINQ9Y4I5 508 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 TNFRSF18Q9Y5U5 241 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 MTCH2Q9Y6C9 303 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 ZHX2Q9Y6X8 837 aa5.06□□□□□ -1.6
YBX3-205ENST00000536107 COL3A1P02461 1466 aaPredicted RBP5.06□□□□□ -1.6
YBX3-205ENST00000536107 SPTBN4Q9H254 2564 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 FGF10O15520 208 aaPredicted RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 GPR42O15529 346 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 MSCO60682 206 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 POLR2BP30876 1174 aaKnown RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 THBS2P35442 1172 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 SELENOPP49908 381 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 CACNB3P54284 484 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 TCF15Q12870 199 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 FAM110CQ1W6H9 321 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 MFSD14CQ5VZR4 134 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 ZNF585AQ6P3V2 769 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 ASCL5Q7RTU5 278 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 PLEKHH3Q7Z736 793 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 FAM178BQ8IXR5 827 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 PNISRQ8TF01 805 aaKnown RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 SOCS4Q8WXH5 440 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 DDX11Q96FC9 970 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 CHAMP1Q96JM3 812 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 RHOVQ96L33 236 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 CDC5LQ99459 802 aaKnown RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 MTIF3Q9H2K0 278 aaKnown RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 CERS4Q9HA82 394 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 PCDH18Q9HCL0 1135 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 CD209Q9NNX6 404 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 SLC45A1Q9Y2W3 748 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 LRRC37AA6NMS7 1700 aa5.05□□□□□ -1.6
YBX3-205ENST00000536107 PTPRZ1P23471 2315 aaPredicted RBP5.05□□□□□ -1.6
YBX3-205ENST00000536107 RPAP1Q9BWH6 1393 aaPredicted RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 NPEPPSL1A6NEC2 478 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 TRIM75PA6NK02 468 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 KIAA0355O15063 1070 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 MUSKO15146 869 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 KLRK1P26718 216 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 PRKAR2BP31323 418 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 RGS2P41220 211 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 ADCYAP1R1P41586 468 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 GCLCP48506 637 aaPredicted RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 RABGGTBP53611 331 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 PPIGQ13427 754 aaKnown RBP eCLIP5.04□□□□□ -1.6
YBX3-205ENST00000536107 CCL14Q16627 93 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 PROSER3Q2NL68 480 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 SPDYAQ5MJ70 313 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 KRT40Q6A162 431 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 MCTP2Q6DN12 878 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 CIR1Q86X95 450 aaPredicted RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 ADSSL1Q8N142 457 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 TXNDC5Q8NBS9 432 aaKnown RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 SLC44A5Q8NCS7 719 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 PEX11GQ96HA9 241 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 LCORQ96JN0 433 aaPredicted RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 PHACTR3Q96KR7 559 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 GORASP1Q9BQQ3 440 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 C11orf84Q9BUA3 381 aaPredicted RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 UPF3BQ9BZI7 483 aaKnown RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 MKRN2Q9H000 416 aaKnown RBP5.04□□□□□ -1.6
YBX3-205ENST00000536107 CNNM2Q9H8M5 875 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 PANK3Q9H999 370 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 TCAF1Q9Y4C2 921 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 DNAH12Q6ZR08 3092 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 ATRNL1Q5VV63 1379 aa5.04□□□□□ -1.6
YBX3-205ENST00000536107 NUP98P52948 1817 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 H0Y858 1186 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 B4GALT3O60512 393 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 PRPF40AO75400 957 aaKnown RBP5.03□□□□□ -1.6
YBX3-205ENST00000536107 ATE1O95260 518 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 ACRP10323 421 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 IL9P15248 144 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 KCNA5P22460 613 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 L1CAMP32004 1257 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 CRKP46108 304 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 EIF4A1P60842 406 aaKnown RBP5.03□□□□□ -1.6
YBX3-205ENST00000536107 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
YBX3-205ENST00000536107 ANO1Q5XXA6 986 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 CWF19L1Q69YN2 538 aaKnown RBP5.03□□□□□ -1.6
YBX3-205ENST00000536107 OVOS1Q6IE37 1185 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 ZNF365Q70YC5 407 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 CABP7Q86V35 215 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 KYQ8NBH2 561 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 NETO2Q8NC67 525 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 ARNTL2Q8WYA1 636 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 DSCC1Q9BVC3 393 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 ANKRD2Q9GZV1 360 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.03□□□□□ -1.6
YBX3-205ENST00000536107 RXFP1Q9HBX9 757 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 TLR9Q9NR96 1032 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 IGSF5Q9NSI5 407 aa5.03□□□□□ -1.6
YBX3-205ENST00000536107 NUDT5Q9UKK9 219 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms