RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 LRRC32Q14392 662 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 ZBTB41Q5SVQ8 909 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 PROKR1Q8TCW9 393 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 CPPED1Q9BRF8 314 aaPredicted RBP6.79□□□□□ -1.32
VBP1-203ENST00000535916 EPC1Q9H2F5 836 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 TGM5O43548 720 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 SCAF4O95104 1147 aaKnown RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 LY86O95711 162 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 ABHD16AO95870 558 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 GCP02774 474 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 BMP5P22003 454 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 ZFP36P26651 326 aaKnown RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 NEK4P51957 841 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 LRRC55Q6ZSA7 311 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 CDYL2Q8N8U2 506 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 OR5M3Q8NGP4 307 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 GPR150Q8NGU9 434 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 ZNF496Q96IT1 587 aaPredicted RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 FDXACB1Q9BRP7 624 aaPredicted RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 CPEB1Q9BZB8 566 aaKnown RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 MTFR1LQ9H019 292 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 ZNF768Q9H5H4 540 aaKnown RBP6.78□□□□□ -1.32
VBP1-203ENST00000535916 USP18Q9UMW8 372 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 CD2APQ9Y5K6 639 aa6.78□□□□□ -1.32
VBP1-203ENST00000535916 PFKMP08237 780 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 LY6G5CQ5SRR4 150 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 ESPNLQ6ZVH7 1005 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 KIF18BQ86Y91 864 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 OR52N2Q8NGI0 321 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 FERMT2Q96AC1 680 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 LSM14BQ9BX40 385 aaKnown RBP6.77□□□□□ -1.33
VBP1-203ENST00000535916 MSRAQ9UJ68 235 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 HS3ST4Q9Y661 456 aa6.77□□□□□ -1.33
VBP1-203ENST00000535916 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 AHRRA9YTQ3 701 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 TRIM24O15164 1050 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 SEC24DO94855 1032 aaPredicted RBP6.76□□□□□ -1.33
VBP1-203ENST00000535916 MRPL49Q13405 166 aaKnown RBP6.76□□□□□ -1.33
VBP1-203ENST00000535916 KCNV1Q6PIU1 500 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 PASD1Q8IV76 773 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 MS4A5Q9H3V2 200 aa6.76□□□□□ -1.33
VBP1-203ENST00000535916 EIF2B4Q9UI10 523 aaKnown RBP6.76□□□□□ -1.33
VBP1-203ENST00000535916 GRID2IPA4D2P6 1211 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 DNAJC6O75061 913 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 RECQL4O94761 1208 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 GYPEP15421 78 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 POU3F2P20265 443 aaPredicted RBP6.75□□□□□ -1.33
VBP1-203ENST00000535916 PTPAQ15257 358 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 VPS72Q15906 364 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 CCDC144BQ3MJ40 725 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 LRRTM3Q86VH5 581 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 SYNPOQ8N3V7 929 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
VBP1-203ENST00000535916 IL17RAQ96F46 866 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 FAM193BQ96PV7 902 aaPredicted RBP6.75□□□□□ -1.33
VBP1-203ENST00000535916 PDCD2LQ9BRP1 358 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
VBP1-203ENST00000535916 USP36Q9P275 1121 aaKnown RBP6.75□□□□□ -1.33
VBP1-203ENST00000535916 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.75□□□□□ -1.33
VBP1-203ENST00000535916 APOBEC3AP31941 199 aaPredicted RBP6.74□□□□□ -1.33
VBP1-203ENST00000535916 ADRA1BP35368 520 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 KPNA1P52294 538 aaPredicted RBP6.74□□□□□ -1.33
VBP1-203ENST00000535916 FAM189BP81408 668 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 TCEA2Q15560 299 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 TKFCQ3LXA3 575 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 TIGD2Q4W5G0 525 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 METTL24Q5JXM2 366 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 DPY19L2P1Q6NXN4 242 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 CNNM4Q6P4Q7 775 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 TAS1R1Q7RTX1 841 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 FAM83AQ86UY5 434 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 GLB1L3Q8NCI6 653 aaPredicted RBP6.74□□□□□ -1.33
VBP1-203ENST00000535916 GAB3Q8WWW8 586 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 PIF1Q9H611 641 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 PCSK5Q92824 1860 aa6.74□□□□□ -1.33
VBP1-203ENST00000535916 PRSS38A1L453 326 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 GZMKP49863 264 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 WNT3AP56704 352 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 MGAT5Q09328 741 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 PCBP1Q15365 356 aaKnown RBP eCLIP6.73□□□□□ -1.33
VBP1-203ENST00000535916 XYLT1Q86Y38 959 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 SMC1BQ8NDV3 1235 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 RNPC3Q96LT9 517 aaKnown RBP6.73□□□□□ -1.33
VBP1-203ENST00000535916 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
VBP1-203ENST00000535916 NDC1Q9BTX1 674 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 PACSIN3Q9UKS6 424 aa6.73□□□□□ -1.33
VBP1-203ENST00000535916 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 A0A1W2PR48 441 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 LPXNO60711 386 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 PPFIA4O75335 1185 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 RHOBTB3O94955 611 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 LMNAP02545 664 aaKnown RBP6.72□□□□□ -1.33
VBP1-203ENST00000535916 LAG3P18627 525 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 PHC1P78364 1004 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 DUSP2Q05923 314 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 GPR158Q5T848 1215 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms