RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 LAMC1P11047 1609 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 COL22A1Q8NFW1 1626 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 C1orf167Q5SNV9 1468 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 DVL2O14641 736 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 TGM5O43548 720 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PHF2O75151 1096 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ALDH1L1O75891 902 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PRKD3O94806 890 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PTX3P26022 381 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 POLD1P28340 1107 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 SARSP49591 514 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 CDKN1CP49918 316 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 NEK2P51955 445 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 FAM50AQ14320 339 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 STILQ15468 1287 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 CLUL1Q15846 466 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 KCNA10Q16322 511 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 SKOR2Q2VWA4 1001 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 RRP12Q5JTH9 1297 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 CCDC181Q5TID7 509 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PPP4R3AQ6IN85 833 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 LMBR1LQ6UX01 489 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 RTN4RL1Q86UN2 441 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 FAM129CQ86XR2 697 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 IGDCC3Q8IVU1 814 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 RBM12BQ8IXT5 1001 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 CLRN3Q8NCR9 226 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 RTF1Q92541 710 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 DDX17Q92841 729 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 FATE1Q969F0 183 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PWWP2AQ96N64 755 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 FMNL2Q96PY5 1086 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ORAI2Q96SN7 254 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 OSBPL6Q9BZF3 934 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ZMAT4Q9H898 229 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 SLC39A2Q9NP94 309 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 BTBD7Q9P203 1132 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ZFP69BQ9UJL9 534 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 TRHDEQ9UKU6 1024 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 SMG5Q9UPR3 1016 aaKnown RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PCDHB6Q9Y5E3 794 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ADAMTS13Q76LX8 1427 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 ADGRL3Q9HAR2 1447 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 NWD2Q9ULI1 1742 aa4.26□□□□□ -1.73
SNHG1-202ENST00000535689 PTPN23Q9H3S7 1636 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 SH3D21A4FU49 640 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 DTNBO60941 627 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 MYBL2P10244 700 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 ATF2P15336 505 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 IL13P35225 146 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 THBS2P35442 1172 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 ID4P47928 161 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 GLRBP48167 497 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 AFF3P51826 1226 aaKnown RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 MEF2AQ02078 507 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 MTMR1Q13613 665 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 HLTFQ14527 1009 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 PLEKHG6Q3KR16 790 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 ERICH6BQ5W0A0 696 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 CREB3L3Q68CJ9 461 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 OGFOD2Q6N063 350 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 KLHDC10Q6PID8 442 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 KANSL1Q7Z3B3 1105 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 KRT28Q7Z3Y7 464 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 SAPCD2Q86UD0 394 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 SP8Q8IXZ3 490 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 RTKN2Q8IZC4 609 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 KLHL36Q8N4N3 616 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 LMBR1Q8WVP7 490 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 FOXRED1Q96CU9 486 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 LCORQ96JN0 433 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 GORASP1Q9BQQ3 440 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 NOL10Q9BSC4 688 aaKnown RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 MYL10Q9BUA6 226 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 CARD11Q9BXL7 1154 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 CSRNP2Q9H175 543 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 BCAS3Q9H6U6 928 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 LUC7LQ9NQ29 371 aaKnown RBP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 AASDHPPTQ9NRN7 309 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 KCND1Q9NSA2 647 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 C14orf119Q9NWQ9 140 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 DNAJC28Q9NX36 388 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNHG1-202ENST00000535689 DENND2AQ9ULE3 1009 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 INVSQ9Y283 1065 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 ANKRD6Q9Y2G4 727 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 GIT1Q9Y2X7 761 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 HCFC2Q9Y5Z7 792 aa4.25□□□□□ -1.73
SNHG1-202ENST00000535689 NALCNQ8IZF0 1738 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 KATNA1O75449 491 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 RBP3P10745 1247 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 POU3F3P20264 500 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
SNHG1-202ENST00000535689 NCKAP1LP55160 1127 aa4.24□□□□□ -1.73
SNHG1-202ENST00000535689 SCAND1P57086 179 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms