RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 C8orf76Q96K31 380 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 C1QTNF1Q9BXJ1 281 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
CCDC60-202ENST00000535685 MYO10Q9HD67 2058 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 MBTPS2O43462 519 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TBX10O75333 385 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 DGAT1O75907 488 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 MUTP22033 750 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 PTENP60484 403 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 CYP4A11Q02928 519 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 DLX2Q07687 328 aaPredicted RBP12.03□□□□□ -0.48
CCDC60-202ENST00000535685 COASYQ13057 564 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
CCDC60-202ENST00000535685 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 CATSPER4Q7RTX7 472 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 ADGRD2Q7Z7M1 963 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 GJD3Q8N144 294 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TMEM143Q96AN5 459 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 PHOX2BQ99453 314 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 MTRQ99707 1265 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 NFKBIZQ9BYH8 718 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TMEM60Q9H2L4 133 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 TUFT1Q9NNX1 390 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 NGRNQ9NPE2 291 aaKnown RBP12.03□□□□□ -0.48
CCDC60-202ENST00000535685 CD320Q9NPF0 282 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 XPNPEP1Q9NQW7 623 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
CCDC60-202ENST00000535685 ZBTB39O15060 712 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 U2AF2P26368 475 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 AXLP30530 894 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 HOXA11P31270 313 aaPredicted RBP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 ARL2P36404 184 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 TXKP42681 527 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 RARRES1P49788 294 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 ERVFC1P60507 584 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 KRT17Q04695 432 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 ZP2Q05996 745 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 KCNC3Q14003 757 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 RABEP1Q15276 862 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 DUSP6Q16828 381 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 TWF2Q6IBS0 349 aaKnown RBP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 PADI6Q6TGC4 694 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 ADHFE1Q8IWW8 467 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 SLC39A11Q8N1S5 342 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 HELQQ8TDG4 1101 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 PGBD4Q96DM1 585 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 CCDC51Q96ER9 411 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 POLR3CQ9BUI4 534 aaPredicted RBP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 TLE6Q9H808 572 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 MINDY3Q9H8M7 445 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 CD207Q9UJ71 328 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 DBR1Q9UK59 544 aaKnown RBP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
CCDC60-202ENST00000535685 CNTNAP2Q9UHC6 1331 aa12.02□□□□□ -0.49
CCDC60-202ENST00000535685 TRIOO75962 3097 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 INPPL1O15357 1258 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 LINC01565O15544 149 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 GPR37L1O60883 481 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 OFD1O75665 1012 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 GLP2RO95838 553 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 IBSPP21815 317 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-202ENST00000535685 RPA1P27694 616 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 NRIP1P48552 1158 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 TFDP1Q14186 410 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 UBXN11Q5T124 520 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 RNF149Q8NC42 400 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 TMUB1Q9BVT8 246 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 IGFLR1Q9H665 355 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 EPHX3Q9H6B9 360 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 STK39Q9UEW8 545 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 PCDHB2Q9Y5E7 798 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 IRAK3Q9Y616 596 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 TRIP11Q15643 1979 aa12.01□□□□□ -0.49
CCDC60-202ENST00000535685 POTEMA6NI47 508 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 OR52Z1P0C646 297 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 SRGAP2CP0DJJ0 459 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms