RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 DGAT1O75907 488 aa18.41■□□□□ 0.54
PHRF1-206ENST00000534320 ZRANB2O95218 330 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■■□ 25.7
PHRF1-206ENST00000534320 COPB2P35606 906 aa18.41■□□□□ 0.54
PHRF1-206ENST00000534320 BASP1P80723 227 aaKnown RBP18.41■□□□□ 0.54
PHRF1-206ENST00000534320 E2F5Q15329 346 aa18.41■□□□□ 0.54
PHRF1-206ENST00000534320 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.543e-7■■■□□ 16
PHRF1-206ENST00000534320 BEGAINQ9BUH8 593 aa18.41■□□□□ 0.54
PHRF1-206ENST00000534320 NOVA2Q9UNW9 492 aaKnown RBP18.41■□□□□ 0.54
PHRF1-206ENST00000534320 SNX24Q9Y343 169 aa18.41■□□□□ 0.54
PHRF1-206ENST00000534320 RASGRF2O14827 1237 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 UCHL3P15374 230 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 C2orf69Q8N8R5 385 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 CFAP61Q8NHU2 1237 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 CDKL2Q92772 493 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 SCAF8Q9UPN6 1271 aaKnown RBP18.4■□□□□ 0.54
PHRF1-206ENST00000534320 NR1D1P20393 614 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 IL9RQ01113 521 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 ANGEL2Q5VTE6 544 aaKnown RBP18.4■□□□□ 0.54
PHRF1-206ENST00000534320 MMS22LQ6ZRQ5 1243 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 LRRC8CQ8TDW0 803 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 IL17RBQ9NRM6 502 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 POLE2P56282 527 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 SESN3P58005 492 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 XKR3Q5GH77 459 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 ZWILCHQ9H900 591 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 ZC4H2Q9NQZ6 224 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 ACTN1P12814 892 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 PLS3P13797 630 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 FMO5P49326 533 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 ZNF211Q13398 564 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-206ENST00000534320 GSPT2Q8IYD1 628 aaKnown RBP18.4■□□□□ 0.54
PHRF1-206ENST00000534320 OR6B3Q8NGW1 331 aa18.4■□□□□ 0.54
PHRF1-206ENST00000534320 A0A1W2PQJ5 194 aa18.39■□□□□ 0.54
PHRF1-206ENST00000534320 CALB1P05937 261 aa18.39■□□□□ 0.54
PHRF1-206ENST00000534320 GMPSP49915 693 aaPredicted RBP18.39■□□□□ 0.54
PHRF1-206ENST00000534320 TKFCQ3LXA3 575 aa18.39■□□□□ 0.54
PHRF1-206ENST00000534320 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.54
PHRF1-206ENST00000534320 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.54
PHRF1-206ENST00000534320 SNX12Q9UMY4 172 aa18.39■□□□□ 0.54
PHRF1-206ENST00000534320 TJP3O95049 919 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 STAT5BP51692 787 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 AGPAT1Q99943 283 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 POLR3CQ9BUI4 534 aaPredicted RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 STK33Q9BYT3 514 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 APEX2Q9UBZ4 518 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 PLAAQ9Y263 795 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 MSH4O15457 936 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 KIF1CO43896 1103 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 GNA15P30679 374 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 ZC2HC1CQ53FD0 456 aaPredicted RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 CNOT10Q9H9A5 744 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 AK9Q5TCS8 1911 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 PFASO15067 1338 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 GIPC1O14908 333 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 CTNND1O60716 968 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 CCNYQ8ND76 341 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 ZNF668Q96K58 619 aaPredicted RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 DDX47Q9H0S4 455 aaKnown RBP18.39■□□□□ 0.53
PHRF1-206ENST00000534320 RIOX1Q9H6W3 641 aa18.39■□□□□ 0.53
PHRF1-206ENST00000534320 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 KLK7P49862 253 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ADCY1Q08828 1119 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 TMED2Q15363 201 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ITKQ08881 620 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 IFT88Q13099 833 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 SIX6OS1Q8N1H7 587 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 CCDC197Q8NCU1 140 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 SPATA4Q8NEY3 305 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 PPP4R1Q8TF05 950 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 HEMGNQ9BXL5 484 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 DEFB129Q9H1M3 183 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ELP3Q9H9T3 547 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 TOPORSQ9NS56 1045 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 KBTBD4Q9NVX7 518 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 EIF3DO15371 548 aaKnown RBP eCLIP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 CREB3O43889 395 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ERGIC2Q96RQ1 377 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 TSC22D3Q99576 134 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 SUN1O94901 812 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 RSRC2Q7L4I2 434 aaKnown RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ABI1Q8IZP0 508 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 SYT2Q8N9I0 419 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ACTR5Q9H9F9 607 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-206ENST00000534320 ANXA13P27216 316 aa18.37■□□□□ 0.53
PHRF1-206ENST00000534320 ECE1P42892 770 aa18.37■□□□□ 0.53
PHRF1-206ENST00000534320 EFNA5P52803 228 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms