RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
ATM-223ENST00000533979 NUMBLQ9Y6R0 609 aa6.09□□□□□ -1.43
ATM-223ENST00000533979 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 UBE2QL1A1L167 161 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 MYCLP1P12525 358 aaPredicted RBP6.08□□□□□ -1.44
ATM-223ENST00000533979 HNRNPLP14866 589 aaKnown RBP eCLIP6.08□□□□□ -1.44
ATM-223ENST00000533979 POU3F3P20264 500 aaPredicted RBP6.08□□□□□ -1.44
ATM-223ENST00000533979 STAT3P40763 770 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 GPR15P49685 360 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 TERF2Q15554 542 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 USP51Q70EK9 711 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 GAREM2Q75VX8 874 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 C11orf74Q86VG3 221 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 RAVER1Q8IY67 606 aaKnown RBP6.08□□□□□ -1.44
ATM-223ENST00000533979 CMTM4Q8IZR5 234 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 MIEF2Q96C03 454 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 TCF25Q9BQ70 676 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 FAM126AQ9BYI3 521 aaPredicted RBP6.08□□□□□ -1.44
ATM-223ENST00000533979 GIT1Q9Y2X7 761 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 LMTK3Q96Q04 1460 aa6.08□□□□□ -1.44
ATM-223ENST00000533979 CYR61O00622 381 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 MTSS1O43312 755 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 TOX4O94842 621 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 CNGA1P29973 690 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 CCSAPQ6IQ19 270 aaPredicted RBP6.07□□□□□ -1.44
ATM-223ENST00000533979 DDX46Q7L014 1031 aaKnown RBP6.07□□□□□ -1.44
ATM-223ENST00000533979 RASSF3Q86WH2 238 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
ATM-223ENST00000533979 UBE2Q2Q8WVN8 375 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 PCGF6Q9BYE7 350 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 WNT8AQ9H1J5 351 aa6.07□□□□□ -1.44
ATM-223ENST00000533979 C14orf93Q9H972 538 aaKnown RBP6.07□□□□□ -1.44
ATM-223ENST00000533979 HECAQ9UBI9 543 aaPredicted RBP6.07□□□□□ -1.44
ATM-223ENST00000533979 CREB3O43889 395 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 ZEB2O60315 1214 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 MFAP3LO75121 409 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 PCDH8O95206 1070 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 ADCYAP1R1P41586 468 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 IL2P60568 153 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 BIRC2Q13490 618 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 DHCR24Q15392 516 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 CCDC178Q5BJE1 867 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 KRT40Q6A162 431 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 THNSL2Q86YJ6 484 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 GAB3Q8WWW8 586 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
ATM-223ENST00000533979 SORCS2Q96PQ0 1159 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 UIMC1Q96RL1 719 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 RPS6KC1Q96S38 1066 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 ZNF341Q9BYN7 854 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 IL23AQ9NPF7 189 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 RCAN3Q9UKA8 241 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 PCDHB6Q9Y5E3 794 aa6.06□□□□□ -1.44
ATM-223ENST00000533979 XDHP47989 1333 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 PRSS38A1L453 326 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 CAPN14A8MX76 684 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 PDE8AO60658 829 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 PFKMP08237 780 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 GAAP10253 952 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 CD69Q07108 199 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 BROXQ5VW32 411 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 MFSD5Q6N075 450 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 CDYL2Q8N8U2 506 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 CHAC2Q8WUX2 184 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 EMC7Q9NPA0 242 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 SRRDQ9UH36 339 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
ATM-223ENST00000533979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 KIF3BO15066 747 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 NRP2O60462 931 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 PEX11BO96011 259 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 BPIP17213 487 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 XPAP23025 273 aaPredicted RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 GNALP38405 381 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 NPEPPSP55786 919 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 UBE4AQ14139 1066 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 RRP1BQ14684 758 aaKnown RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 NFE2Q16621 373 aaPredicted RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 LSM12Q3MHD2 195 aaKnown RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 FKBP15Q5T1M5 1219 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 CYB5RLQ6IPT4 315 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 TAS1R1Q7RTX1 841 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 DDX42Q86XP3 938 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-223ENST00000533979 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 TMPRSS11EQ9UL52 423 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 USP18Q9UMW8 372 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 NOC2LQ9Y3T9 749 aaKnown RBP6.04□□□□□ -1.44
ATM-223ENST00000533979 NACADO15069 1562 aa6.04□□□□□ -1.44
ATM-223ENST00000533979 ST20-MTHFSA0A0A6YYL1 179 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 ALG1L2C9J202 215 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 TSPAN6O43657 245 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 ALDH1L1O75891 902 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 EPHB1P54762 984 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 PTH1RQ03431 593 aa6.03□□□□□ -1.44
ATM-223ENST00000533979 DDB1Q16531 1140 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms