RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CALR3Q96L12 384 aaKnown RBP16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 AMFRQ9UKV5 643 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
CACNA1E-208ENST00000533229 ANKRD62A6NC57 917 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 KRIT1O00522 736 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 P4HA2O15460 535 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 ZNF862O60290 1169 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 RGS20O76081 388 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 RFX1P22670 979 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 NPTX2P47972 431 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 GMPSP49915 693 aaPredicted RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 LEKR1Q6ZMV7 388 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 FAM76AQ8TAV0 307 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 BSNDQ8WZ55 320 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 BHMG1C9JSJ3 638 aaPredicted RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 TULP1O00294 542 aaPredicted RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 HSF2BPO75031 334 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 RPS6KA5O75582 802 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 NR3C2P08235 984 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 SFNP31947 248 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 TGFB2P61812 414 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 KRT76Q01546 638 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 REPS2Q8NFH8 660 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 SEMA4DQ92854 862 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 ANKEF1Q9NU02 776 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 CHORDC1Q9UHD1 332 aaPredicted RBP16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 AMACRQ9UHK6 382 aa16.6■□□□□ 0.25
CACNA1E-208ENST00000533229 ZNF233A6NK53 670 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 CNGA1P29973 690 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 CETN1Q12798 172 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 KREMEN1Q96MU8 473 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 PCDHB18PQ96TA0 734 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 TIPINQ9BVW5 301 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 NEUROG2Q9H2A3 272 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 CNOT7Q9UIV1 285 aaKnown RBP16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 DAAM1Q9Y4D1 1078 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 PFASO15067 1338 aa16.59■□□□□ 0.25
CACNA1E-208ENST00000533229 GOLGA8KD6RF30 607 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 MAPK13O15264 365 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 STBD1O95210 358 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 SGPL1O95470 568 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 FGGP02679 453 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 FTLP02792 175 aaPredicted RBP16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 MXI1P50539 228 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 SLC39A4Q6P5W5 647 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 FMNL3Q8IVF7 1028 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 MAP4K3Q8IVH8 894 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 MREGQ8N565 214 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 PCDHA10Q9Y5I2 948 aa16.58■□□□□ 0.25
CACNA1E-208ENST00000533229 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 TULP2O00295 520 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 OPA1O60313 960 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 CHRNB2P17787 502 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 PTPRAP18433 802 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 RPS12P25398 132 aaKnown RBP16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 USP8P40818 1118 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 HMGCS2P54868 508 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 MCCD1P59942 119 aaPredicted RBP16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 NAA35Q5VZE5 725 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 NLRX1Q86UT6 975 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 ZNF214Q9UL59 606 aaPredicted RBP16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 GJA3Q9Y6H8 435 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
CACNA1E-208ENST00000533229 MYH11P35749 1972 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 KCNA2P16389 499 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 BAG6P46379 1132 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 CFAP58Q5T655 872 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 KCTD16Q68DU8 428 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 NOP9Q86U38 636 aaKnown RBP16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
CACNA1E-208ENST00000533229 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms