RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 FIZ1Q96SL8 496 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 PARVGQ9HBI0 331 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 TMEM161AQ9NX61 479 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 INSL6Q9Y581 213 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 PCDHB7Q9Y5E2 793 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 K7ERI5 159 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 ACKR2O00590 384 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 ZNF623O75123 536 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TBCAO75347 108 aaKnown RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 LIG1P18858 919 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 GATMP50440 423 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 NDUFA8P51970 172 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 NCKAP1LP55160 1127 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TAP1Q03518 808 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 NOTUMQ6P988 496 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 FSIP1Q8NA03 581 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 YME1L1Q96TA2 773 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 PYM1Q9BRP8 204 aaKnown RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TTYH1Q9H313 450 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-214ENST00000533209 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
SSBP3-214ENST00000533209 TCHHQ07283 1943 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 EOMESO95936 686 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
SSBP3-214ENST00000533209 RAB27AP51159 221 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 SMTNP53814 917 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 PRPF4BQ13523 1007 aaKnown RBP13.2□□□□□ -0.3
SSBP3-214ENST00000533209 CNNM4Q6P4Q7 775 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
SSBP3-214ENST00000533209 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-214ENST00000533209 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 KCNN1Q92952 543 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
SSBP3-214ENST00000533209 TRIM9Q9C026 710 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 LRRC27Q9C0I9 530 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 ZHX3Q9H4I2 956 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 SLC28A3Q9HAS3 691 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 KCNG1Q9UIX4 513 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 SZT2Q5T011 3432 aa13.2□□□□□ -0.3
SSBP3-214ENST00000533209 LINC01553A4QN01 128 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 TRAK2O60296 914 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 FGFR1P11362 822 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SKIP12755 728 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 GAP43P17677 238 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SYKP43405 635 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 AMPD3Q01432 767 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 EEF1DP3Q658K8 133 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 Q7L0L9 218 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SPRED2Q7Z698 418 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
SSBP3-214ENST00000533209 LPPQ93052 612 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
SSBP3-214ENST00000533209 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 H0YCG3 227 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 K7ENM7 598 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 N4BP3O15049 544 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 HOXA2O43364 376 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 NPTXRO95502 500 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms