RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 INPP5FQ9Y2H2 1132 aa21.08■□□□□ 0.97
SSH3-209ENST00000532600 OR52Z1P0C646 297 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 TOB1P50616 345 aaPredicted RBP21.07■□□□□ 0.96
SSH3-209ENST00000532600 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
SSH3-209ENST00000532600 TTC38Q5R3I4 469 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 GLB1LQ6UWU2 654 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 LRFN3Q9BTN0 628 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 POLR3CQ9BUI4 534 aaPredicted RBP21.07■□□□□ 0.96
SSH3-209ENST00000532600 VN1R3Q9BXE9 311 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 TUFT1Q9NNX1 390 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 GPRC5CQ9NQ84 441 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 ENTPD7Q9NQZ7 604 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 FAM50BQ9Y247 325 aa21.07■□□□□ 0.96
SSH3-209ENST00000532600 FAM86C2PA6NEL3 165 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 USO1O60763 962 aaKnown RBP21.06■□□□□ 0.96
SSH3-209ENST00000532600 ZC3H11AO75152 810 aaKnown RBP eCLIP21.06■□□□□ 0.96
SSH3-209ENST00000532600 GALTP07902 379 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
SSH3-209ENST00000532600 U2AF2P26368 475 aaKnown RBP eCLIP21.06■□□□□ 0.96
SSH3-209ENST00000532600 POU5F1BQ06416 359 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 ECM1Q16610 540 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 POTEGQ6S5H5 508 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 TMEM184AQ6ZMB5 413 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 CPB2Q96IY4 423 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 CDCA3Q99618 268 aaPredicted RBP21.06■□□□□ 0.96
SSH3-209ENST00000532600 POLR3FQ9H1D9 316 aaPredicted RBP21.06■□□□□ 0.96
SSH3-209ENST00000532600 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
SSH3-209ENST00000532600 NGRNQ9NPE2 291 aaKnown RBP21.06■□□□□ 0.96
SSH3-209ENST00000532600 PUF60Q9UHX1 559 aaKnown RBP21.06■□□□□ 0.96
SSH3-209ENST00000532600 C2orf71A6NGG8 1288 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 K7ELQ4 463 aaPredicted RBP21.05■□□□□ 0.96
SSH3-209ENST00000532600 B4GALT5O43286 388 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 DDHD2O94830 711 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 SLC11A1P49279 550 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 KRT17Q04695 432 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 ORC2Q13416 577 aaPredicted RBP21.05■□□□□ 0.96
SSH3-209ENST00000532600 FAM184AQ8NB25 1140 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 IGSF21Q96ID5 467 aa21.05■□□□□ 0.96
SSH3-209ENST00000532600 DBR1Q9UK59 544 aaKnown RBP21.05■□□□□ 0.96
SSH3-209ENST00000532600 USP15Q9Y4E8 981 aaPredicted RBP21.05■□□□□ 0.96
SSH3-209ENST00000532600 NCLP19338 710 aaKnown RBP21.04■□□□□ 0.96
SSH3-209ENST00000532600 RPA1P27694 616 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 TRAPPC10P48553 1259 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 ALDH7A1P49419 539 aaKnown RBP21.04■□□□□ 0.96
SSH3-209ENST00000532600 SYCE2Q6PIF2 218 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 MAEAQ7L5Y9 396 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 TMC7Q7Z402 723 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
SSH3-209ENST00000532600 RSPH1Q8WYR4 309 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 PGBD4Q96DM1 585 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 ZBP1Q9H171 429 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 S1PR5Q9H228 398 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 RSAD1Q9HA92 442 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 HES2Q9Y543 173 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 IPPQ9Y573 584 aa21.04■□□□□ 0.96
SSH3-209ENST00000532600 INO80B-WBP1J3KQ70 363 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 GPR37L1O60883 481 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 ARF4P18085 180 aaPredicted RBP21.03■□□□□ 0.96
SSH3-209ENST00000532600 TFDP1Q14186 410 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 LLGL2Q6P1M3 1020 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 AUTS2Q8WXX7 1259 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 BSNDQ8WZ55 320 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 SUSD6Q92537 303 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 GBP3Q9H0R5 595 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 PCDHB6Q9Y5E3 794 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 CNTNAP2Q9UHC6 1331 aa21.03■□□□□ 0.96
SSH3-209ENST00000532600 TTLL13PA6NNM8 815 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 INPPL1O15357 1258 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 CLASP2O75122 1294 aaKnown RBP21.02■□□□□ 0.96
SSH3-209ENST00000532600 ERLIN2O94905 339 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 AXLP30530 894 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.96
SSH3-209ENST00000532600 SMC1AQ14683 1233 aaKnown RBP21.02■□□□□ 0.96
SSH3-209ENST00000532600 PCBP1Q15365 356 aaKnown RBP eCLIP21.02■□□□□ 0.96
SSH3-209ENST00000532600 IL17AQ16552 155 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 TMEM31Q5JXX7 168 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 ANKRD54Q6NXT1 300 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 DDX53Q86TM3 631 aaKnown RBP21.02■□□□□ 0.96
SSH3-209ENST00000532600 CDR2LQ86X02 465 aaPredicted RBP21.02■□□□□ 0.96
SSH3-209ENST00000532600 VPS52Q8N1B4 723 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 TMEM169Q96HH4 297 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 NACC1Q96RE7 527 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 CSRNP2Q9H175 543 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 MIOSQ9NXC5 875 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 CDH22Q9UJ99 828 aa21.02■□□□□ 0.96
SSH3-209ENST00000532600 POMCP01189 267 aa21.01■□□□□ 0.95
SSH3-209ENST00000532600 RNASELQ05823 741 aaKnown RBP21.01■□□□□ 0.95
SSH3-209ENST00000532600 CDCA2Q69YH5 1023 aaPredicted RBP21.01■□□□□ 0.95
SSH3-209ENST00000532600 NOTUMQ6P988 496 aa21.01■□□□□ 0.95
SSH3-209ENST00000532600 CCDC51Q96ER9 411 aa21.01■□□□□ 0.95
SSH3-209ENST00000532600 CCDC43Q96MW1 224 aaKnown RBP21.01■□□□□ 0.95
SSH3-209ENST00000532600 NXF3Q9H4D5 531 aaKnown RBP21.01■□□□□ 0.95
SSH3-209ENST00000532600 LOC730098B7Z3J9 87 aa21■□□□□ 0.95
SSH3-209ENST00000532600 CXCL14O95715 111 aa21■□□□□ 0.95
SSH3-209ENST00000532600 EDN1P05305 212 aa21■□□□□ 0.95
SSH3-209ENST00000532600 CTSAP10619 480 aa21■□□□□ 0.95
SSH3-209ENST00000532600 ITGA4P13612 1032 aa21■□□□□ 0.95
SSH3-209ENST00000532600 GJB2P29033 226 aa21■□□□□ 0.95
SSH3-209ENST00000532600 PTGDRQ13258 359 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms