RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CYBBP04839 570 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 RAG1P15918 1043 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 PDIA5Q14554 519 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 PBKQ96KB5 322 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 RIT2Q99578 217 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 SPATC1LQ9H0A9 340 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-221ENST00000532331 STAP1Q9ULZ2 295 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 GPR182O15218 404 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.479e-11■□□□□ 11.3
PTPRK-221ENST00000532331 APOEP02649 317 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
PTPRK-221ENST00000532331 PSMA2P25787 234 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 BTBD8Q5XKL5 378 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 BZW1Q7L1Q6 419 aaKnown RBP12.09□□□□□ -0.47
PTPRK-221ENST00000532331 PROM2Q8N271 834 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 SEPT8Q92599 483 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 DDX50Q9BQ39 737 aaKnown RBP12.09□□□□□ -0.47
PTPRK-221ENST00000532331 TRIM56Q9BRZ2 755 aaKnown RBP12.09□□□□□ -0.47
PTPRK-221ENST00000532331 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 ECEL1O95672 775 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 DYNLT1P63172 113 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 PDE1BQ01064 536 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.471e-9■■□□□ 13.8
PTPRK-221ENST00000532331 MAP3K14Q99558 947 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 EHD2Q9NZN4 543 aa12.09□□□□□ -0.47
PTPRK-221ENST00000532331 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 IGDCC4Q8TDY8 1250 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 TTC25Q96NG3 672 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 YME1L1Q96TA2 773 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 HOXA2O43364 376 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 MOCS3O95396 460 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 MAP3K21Q5TCX8 1036 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 DARS2Q6PI48 645 aaKnown RBP12.08□□□□□ -0.48
PTPRK-221ENST00000532331 FBXO16Q8IX29 292 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-221ENST00000532331 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-221ENST00000532331 LSM7Q9UK45 103 aaKnown RBP12.08□□□□□ -0.48
PTPRK-221ENST00000532331 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 KCNH7Q9NS40 1196 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 DNAJC12Q9UKB3 198 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 UBE4BO95155 1302 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 LRRD1A4D1F6 860 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 POC1B-GALNT4F8VUJ3 575 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 CD4P01730 458 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 PANX2Q96RD6 677 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 CAPS2Q9BXY5 557 aa12.08□□□□□ -0.48
PTPRK-221ENST00000532331 PRMT7Q9NVM4 692 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-221ENST00000532331 FKTNO75072 461 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 TMEM132DQ14C87 1099 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 KRT39Q6A163 491 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SAMD3Q8N6K7 520 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 FAM71BQ8TC56 605 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 LRRC8CQ8TDW0 803 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 C3P01024 1663 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SNX1Q13596 522 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 NAA25Q14CX7 972 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 DYRK4Q9NR20 520 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PCDHA13Q9Y5I0 950 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 CASQ2O14958 399 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-221ENST00000532331 RBP5P82980 135 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 ACRBPQ8NEB7 543 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 KIAA1683Q9H0B3 1180 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PP2D1A8MPX8 630 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 CPP00450 1065 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 FGFR2P21802 821 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 COG7P83436 770 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PPIL2Q13356 520 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 KRT31Q15323 416 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 GLYCTKQ8IVS8 523 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 HSPH1Q92598 858 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 ADAM22Q9P0K1 906 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 AGAP1Q9UPQ3 857 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 SOWAHDA6NJG2 315 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 NDUFA10O95299 355 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 DSG3P32926 999 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 EPHB4P54760 987 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
PTPRK-221ENST00000532331 DCP1BQ8IZD4 617 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms