RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ABHD15Q6UXT9 468 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PLPPR4Q7Z2D5 763 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 C11orf96Q7Z7L8 435 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SERINC5Q86VE9 423 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 FBXO18Q8NFZ0 1043 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 CAGE1Q8TC20 777 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLC5A5Q92911 643 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 ATP6V0A1Q93050 837 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 GJA10Q969M2 543 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SCLYQ96I15 445 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 MBOAT7Q96N66 472 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 CTAGE1Q96RT6 745 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PCYT2Q99447 389 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 TEKT3Q9BXF9 490 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 WNT8AQ9H1J5 351 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF302Q9NR11 478 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SAMM50Q9Y512 469 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PCDHA10Q9Y5I2 948 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 IGKV6D-21A0A0A0MT36 114 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 RRN3P2A6NIE6 340 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 TBX3O15119 743 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 PDPK1O15530 556 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 CHMP2AO43633 222 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 PSMD10O75832 226 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 FGBP02675 491 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 MYL1P05976 194 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 HSP90AA1P07900 732 aaKnown RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 PFKMP08237 780 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 ACRP10323 421 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 CKBP12277 381 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 INSRRP14616 1297 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 SELPP16109 830 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 HOXC8P31273 242 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 SFNP31947 248 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 RFC2P35250 354 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 THPOP40225 353 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 JAK3P52333 1124 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 DHX9Q08211 1270 aaKnown RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 PLCB4Q15147 1175 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 GRIK4Q16099 956 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 FOXD4L6Q3SYB3 417 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 C9orf50Q5SZB4 431 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 TAF2Q6P1X5 1199 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 FOXD4L3Q6VB84 417 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 LRRC8DQ7L1W4 858 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 C16orf59Q7L2K0 433 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 DEFB128Q7Z7B8 93 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCDC60Q8IWA6 550 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLFN12Q8IYM2 578 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 ETNPPLQ8TBG4 499 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 AFAP1L1Q8TED9 768 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 ATP8B4Q8TF62 1192 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 THAP3Q8WTV1 239 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 FOXP1Q9H334 677 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 UNC45AQ9H3U1 944 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 DISC1Q9NRI5 854 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 MCM8Q9UJA3 840 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 SMC3Q9UQE7 1217 aa6.48□□□□□ -1.37
HMGB1P42-201ENST00000532126 A6NJY4 79 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 H3BQV1 296 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 HBP1O60381 514 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 NEMFO60524 1076 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 BAG4O95429 457 aaKnown RBP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ACTN1P12814 892 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 GJB2P29033 226 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 GSTT1P30711 240 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 FXR1P51114 621 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 PTPN5P54829 565 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ADAM17P78536 824 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 CBLBQ13191 982 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 CALCRLQ16602 461 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 TRIM71Q2Q1W2 868 aaKnown RBP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 TMEM240Q5SV17 173 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 MARCH8Q5T0T0 291 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF618Q5T7W0 954 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 OTOP2Q7RTS6 562 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 TRMT1LQ7Z2T5 733 aaKnown RBP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 MIER3Q7Z3K6 550 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 CYP2U1Q7Z449 544 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 RSPH3Q86UC2 560 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ETFBKMTQ8IXQ9 262 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 RDM1Q8NG50 284 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms