RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 M0QZ92 97 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 PQBP1O60828 265 aaKnown RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 GPR32O75388 356 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 LETM1O95202 739 aaPredicted RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 IDEP14735 1019 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 GPC3P51654 580 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 CRYBB1P53674 252 aaPredicted RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 NCKAP1LP55160 1127 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 MRPS6P82932 125 aaKnown RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 GUCA2AQ02747 115 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 TLE2Q04725 743 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 MGAT3Q09327 533 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 COASYQ13057 564 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 PNOCQ13519 176 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 CAPSQ13938 189 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 SCUBE3Q8IX30 993 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 MYCT1Q8N699 235 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 PPP1R13LQ8WUF5 828 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 FIZ1Q96SL8 496 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 INO80BQ9C086 356 aaPredicted RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 C2orf40Q9H1Z8 148 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 EXOC1Q9NV70 894 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 PCDHA5Q9Y5H7 936 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 TRPV2Q9Y5S1 764 aa13.8□□□□□ -0.2
COPB1-208ENST00000532088 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
COPB1-208ENST00000532088 CLTBP09497 229 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 PHKA2P46019 1235 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 NPTX2P47972 431 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 EFNA5P52803 228 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 PTENP60484 403 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 COBLL1Q53SF7 1204 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
COPB1-208ENST00000532088 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 ODR4Q5SWX8 454 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 STXBP4Q6ZWJ1 553 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 SRGAP1Q7Z6B7 1085 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 RHPN2Q8IUC4 686 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 HVCN1Q96D96 273 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 PCMTD1Q96MG8 357 aaPredicted RBP13.79□□□□□ -0.2
COPB1-208ENST00000532088 CELF4Q9BZC1 486 aaKnown RBP13.79□□□□□ -0.2
COPB1-208ENST00000532088 FAM49AQ9H0Q0 323 aaPredicted RBP13.79□□□□□ -0.2
COPB1-208ENST00000532088 ADAMTS10Q9H324 1103 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
COPB1-208ENST00000532088 EVPLQ92817 2033 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 KIAA0355O15063 1070 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 EIF3DO15371 548 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPB1-208ENST00000532088 VTNP04004 478 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 CKBP12277 381 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 CASP1P29466 404 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 PPP1R2P41236 205 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 PEX3P56589 373 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 SOX10P56693 466 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
COPB1-208ENST00000532088 COPS2P61201 443 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 CAMK4Q16566 473 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 ZNF720Q7Z2F6 126 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 ZBTB8OSQ8IWT0 167 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 DEPTORQ8TB45 409 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 WNT8BQ93098 351 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
COPB1-208ENST00000532088 STRA6Q9BX79 667 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
COPB1-208ENST00000532088 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 UBE4BO95155 1302 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 MYH11P35749 1972 aa13.78□□□□□ -0.2
COPB1-208ENST00000532088 SFI1A8K8P3 1242 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 KIF20AO95235 890 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
COPB1-208ENST00000532088 SELPP16109 830 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 THPOP40225 353 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 GTF2BQ00403 316 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 FAM187BQ17R55 369 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 ZNF658Q5TYW1 1059 aaPredicted RBP13.77□□□□□ -0.21
COPB1-208ENST00000532088 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
COPB1-208ENST00000532088 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 LRRC8DQ7L1W4 858 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 TMEM161BQ8NDZ6 487 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 PRIMPOLQ96LW4 560 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms