RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TMEM160	Q9NX00	188 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MCM9	Q9NXL9	1143 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	C6orf203	Q9P0P8	240 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZNF624	Q9P2J8	865 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SLC39A10	Q9ULF5	831 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PASK	Q96RG2	1323 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CCDC196	A0A1B0GTZ2	297 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967		A0A1W2PPC4	97 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FIGNL2	A6NMB9	653 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	AP3D1	O14617	1153 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ARHGAP6	O43182	974 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	GJB3	O75712	270 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	STAM2	O75886	525 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	B3GALT4	O96024	378 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ATP5B	P06576	529 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	GAP43	P17677	238 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PAM	P19021	973 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CCR5	P51681	352 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	RBP5	P82980	135 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	BFSP1	Q12934	665 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	EFR3A	Q14156	821 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	UBE3C	Q15386	1083 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	OASL	Q15646	514 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TMEM266	Q2M3C6	531 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KRT25	Q7Z3Z0	450 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PDZD3	Q86UT5	571 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KCTD6	Q8NC69	237 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	IL17RD	Q8NFM7	739 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	STT3B	Q8TCJ2	826 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	RUBCN	Q92622	972 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TTC9	Q92623	222 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	BICD1	Q96G01	975 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CCDC43	Q96MW1	224 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PPP1R9B	Q96SB3	815 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FEM1B	Q9UK73	627 aa		5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FCF1	Q9Y324	198 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-222	ENST00000531967		A0A0B4J269	797 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	NT5C1B-RDH14	C9J2C7	533 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	UBE2C	O00762	179 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CASQ2	O14958	399 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	MLYCD	O95822	493 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	RARB	P10826	455 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TFEB	P19484	476 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TARS	P26639	723 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	STIP1	P31948	543 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	LRMP	Q12912	555 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	INPP5A	Q14642	412 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ADCK5	Q3MIX3	580 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CTXN3	Q4LDR2	81 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SLC9C2	Q5TAH2	1124 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	GTF2IRD2B	Q6EKJ0	949 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	GTF2IRD2	Q86UP8	949 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	RAB11FIP4	Q86YS3	637 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	RIOX2	Q8IUF8	465 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ANKRD49	Q8WVL7	239 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	LIN28A	Q9H9Z2	209 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PICK1	Q9NRD5	415 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TBCCD1	Q9NVR7	557 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CFAP45	Q9UL16	551 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PCDHA4	Q9UN74	947 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TRIM17	Q9Y577	477 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967		A0A1W2PPL8	197 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967		F8W8V4	182 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	FMO6P	O60774	539 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	KCNH1	O95259	989 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ALDH1A1	P00352	501 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SNRPB2	P08579	225 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SRGAP2C	P0DJJ0	459 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PAX7	P23759	505 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	LSP1	P33241	339 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	UBE3A	Q05086	875 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	MAP3K12	Q12852	859 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TOR2A	Q5JU69	321 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SNX30	Q5VWJ9	437 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	WDR73	Q6P4I2	378 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	EP400NL	Q6ZTU2	488 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	BEND5	Q7L4P6	421 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SLFN11	Q7Z7L1	901 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	BHMT	Q93088	406 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CNDP1	Q96KN2	507 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZDHHC5	Q9C0B5	715 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SLC6A16	Q9GZN6	736 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PGPEP1	Q9NXJ5	209 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SRP68	Q9UHB9	627 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ITM2B	Q9Y287	266 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CNPY2	Q9Y2B0	182 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	STXBP5L	Q9Y2K9	1186 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	RAD54L2	Q9Y4B4	1467 aa		5.77	□□□□□ -1.49
ECHDC1-222	ENST00000531967	DDX39A	O00148	427 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TXNL1	O43396	289 aa		5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SLU7	O95391	586 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	NR2F1	P10589	423 aa		5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	GZMA	P12544	262 aa		5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	MAPK3	P27361	379 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ACSL1	P33121	698 aa		5.76	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CTSO	P43234	321 aa	Predicted RBP	5.76	□□□□□ -1.49

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