RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MAFGO15525 162 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 GAS7O60861 476 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 MED24O75448 989 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 LYPLA2O95372 231 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 CFBP00751 764 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 SSBP05455 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCF11-205ENST00000530906 H2AFXP16104 143 aaPredicted RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 SCP2P22307 547 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 MCM3P25205 808 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 ECE1P42892 770 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 VAV2P52735 878 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 JAG1P78504 1218 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 CKAP4Q07065 602 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 GIT2Q14161 759 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 ADGRE1Q14246 886 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 RRP1BQ14684 758 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 KNOP1Q1ED39 458 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 TKFCQ3LXA3 575 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 CCDC40Q4G0X9 1142 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 PRSS36Q5K4E3 855 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 C10orf76Q5T2E6 689 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 NCAPH2Q6IBW4 605 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 OTOP1Q7RTM1 612 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 SRGAP1Q7Z6B7 1085 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 LDHDQ86WU2 507 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 CREBRFQ8IUR6 639 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 APOBEC3FQ8IUX4 373 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 ACER1Q8TDN7 264 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 UBE2Q2Q8WVN8 375 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 RUBCNQ92622 972 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 VTI1AQ96AJ9 217 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 CCDC42Q96M95 316 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 WDR24Q96S15 920 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 EIF2AK1Q9BQI3 630 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 TEKT3Q9BXF9 490 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 MRPL44Q9H9J2 332 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 PLCB1Q9NQ66 1216 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 TBC1D22BQ9NU19 505 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 OGFRQ9NZT2 677 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 DBR1Q9UK59 544 aaKnown RBP6.11□□□□□ -1.43
PCF11-205ENST00000530906 SLC6A14Q9UN76 642 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCF11-205ENST00000530906 EP400Q96L91 3159 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SHTN1A0MZ66 631 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 C9orf172C9J069 976 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 C19orf81C9J6K1 198 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 IPO5O00410 1097 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 ATP2A1O14983 1001 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PJA2O43164 708 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 DKC1O60832 514 aaKnown RBP eCLIP6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZBED4O75132 1171 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 STAM2O75886 525 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GFPT2O94808 682 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 FAM13AO94988 1023 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ELNP15502 786 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PRLRP16471 622 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 RFX1P22670 979 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GUCY2CP25092 1073 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SFNP31947 248 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ARHGAP25P42331 645 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 EPS15P42566 896 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZNF131P52739 623 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ITIH3Q06033 890 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GOLGA8FQ08AF8 430 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GOLGA8DPQ0D2H9 430 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 KIF5AQ12840 1032 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ADAM9Q13443 819 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 RASA3Q14644 834 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 MBTPS1Q14703 1052 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 MTF1Q14872 753 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 BRD3Q15059 726 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ECM1Q16610 540 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SLC9C1Q4G0N8 1177 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ARSHQ5FYA8 562 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZNF569Q5MCW4 686 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PCNX4Q63HM2 1172 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PDXDC1Q6P996 788 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 WDR59Q6PJI9 974 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 RSRC2Q7L4I2 434 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 HS2ST1Q7LGA3 356 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 CACNA2D4Q7Z3S7 1137 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 KIAA1328Q86T90 577 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SPICE1Q8N0Z3 855 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 RNF10Q8N5U6 811 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 MSL3Q8N5Y2 521 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 TRIM58Q8NG06 486 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SCFD1Q8WVM8 642 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 JAKMIP2Q96AA8 810 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 LENG1Q96BZ8 264 aaPredicted RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 C12orf42Q96LP6 360 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 TEPSINQ96N21 525 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ALS2CR12Q96Q35 445 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 IWS1Q96ST2 819 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 REEP2Q9BRK0 252 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms