RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 OSBPL9Q96SU4 736 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SP110Q9HB58 689 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 KRT82Q9NSB4 513 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 DLC1Q96QB1 1528 aa9.02□□□□□ -0.96
CTNND1-227ENST00000530748 H3BRJ5 948 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ATP5HO75947 161 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ZRANB2O95218 330 aaKnown RBP eCLIP9.02□□□□□ -0.977e-11■■■■■ 70
CTNND1-227ENST00000530748 CASP1P29466 404 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 OCRLQ01968 901 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 EPHA7Q15375 998 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 TAF11Q15544 211 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SCN4BQ8IWT1 228 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SNX19Q92543 992 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 G3BP2Q9UN86 482 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 APOL1O14791 398 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 BNIP3LO60238 219 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 EYA4O95677 639 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 RECQLP46063 649 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 NFX1Q12986 1120 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 C11orf70Q9BRQ4 267 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 PITPNM3Q9BZ71 974 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 CPVLQ9H3G5 476 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ANLNQ9NQW6 1124 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SCOCQ9UIL1 159 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 APOBEC2Q9Y235 224 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SNX24Q9Y343 169 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 YWHABP31946 246 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 GJB4Q9NTQ9 266 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SUN2Q9UH99 717 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 PFASO15067 1338 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 FRMD3A2A2Y4 597 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 RASA4BC9J798 803 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 RASA4O43374 803 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 TMCC1O94876 653 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 KRT14P02533 472 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 ARHGDIAP52565 204 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 HEATR6Q6AI08 1181 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 C1orf228Q6PIY5 440 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 L3MBTL1Q9Y468 752 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
CTNND1-227ENST00000530748 NEXMIFQ5QGS0 1516 aa9.02□□□□□ -0.97
CTNND1-227ENST00000530748 A0A1W2PQC6 194 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 DPYSL4O14531 572 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SPAG7O75391 227 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 ESRRBO95718 433 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 HADHAP40939 763 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 WDR75Q8IWA0 830 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 CXorf38Q8TB03 319 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 KIFC3Q9BVG8 833 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 GTSE1Q9NYZ3 720 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 F5H6K3 240 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 TRPA1O75762 1119 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 TDP2O95551 362 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 MCF2P10911 925 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 KLRC3Q07444 240 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NME3Q13232 169 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 KCNB1Q14721 858 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 RHOT1Q8IXI2 618 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NCLNQ969V3 563 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NRBF2Q96F24 287 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NCK2O43639 380 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 RALAP11233 206 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 IMPG1Q17R60 797 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 KRT80Q6KB66 452 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 OSBPL5Q9H0X9 879 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 A0A0G2JND7 137 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 CCDC195A0A1B0GUA6 201 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 RTN2O75298 545 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 FTLP02792 175 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SKIP12755 728 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SLC1A1P43005 524 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 EFNA5P52803 228 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 ANGPTL8Q6UXH0 198 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 GUF1Q8N442 669 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 OR6J1Q8NGC5 347 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms