RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 RNASELQ05823 741 aaKnown RBP12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 HTR4Q13639 388 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 PRR16Q569H4 304 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 UBXN11Q5T124 520 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 B3GNT9Q6UX72 402 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 SCLT1Q96NL6 688 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 TMEM175Q9BSA9 504 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 RPP25Q9BUL9 199 aaKnown RBP12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 DDX23Q9BUQ8 820 aaKnown RBP12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 ZMYND12Q9H0C1 365 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 ARHGEF3Q9NR81 526 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.49
TM9SF1-210ENST00000530563 COL4A3Q01955 1670 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 INPPL1O15357 1258 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 MYBP10242 640 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 TGM1P22735 817 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 RAB27AP51159 221 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 NONOQ15233 471 aaKnown RBP eCLIP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 RTN1Q16799 776 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 ZNF528Q3MIS6 628 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 LILRA6Q6PI73 481 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 ZC3H14Q6PJT7 736 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 ST13P5Q8NFI4 369 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 SLC5A5Q92911 643 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 RIT2Q99578 217 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 SH2D3AQ9BRG2 576 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 UNC45AQ9H3U1 944 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 ASPMQ8IZT6 3477 aa12.01□□□□□ -0.49
TM9SF1-210ENST00000530563 CACNA1GO43497 2377 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 F8W810 466 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 C2CD2LO14523 706 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 ZBTB43O43298 467 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 MAFO75444 373 aaPredicted RBP12□□□□□ -0.49
TM9SF1-210ENST00000530563 C1RP00736 705 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 ADH1AP07327 375 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 SPATA31D3P0C874 917 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
TM9SF1-210ENST00000530563 AK2P54819 239 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 XKR3Q5GH77 459 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 SPATA31D4Q6ZUB0 917 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 ZNF410Q86VK4 478 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 COLGALT2Q8IYK4 626 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
TM9SF1-210ENST00000530563 STAMQ92783 540 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 NELL1Q92832 810 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 GJA10Q969M2 543 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 HINFPQ9BQA5 517 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
TM9SF1-210ENST00000530563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■□□□ 14
TM9SF1-210ENST00000530563 SUCLA2Q9P2R7 463 aaPredicted RBP12□□□□□ -0.49
TM9SF1-210ENST00000530563 MTF2Q9Y483 593 aaPredicted RBP12□□□□□ -0.49
TM9SF1-210ENST00000530563 LAMA1P25391 3075 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 SPEGQ15772 3267 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 PSMD10O75832 226 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 GLUD1P00367 558 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 POMCP01189 267 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 SFNP31947 248 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 GPC5P78333 572 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 DSG1Q02413 1049 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 DSC1Q08554 894 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 SYNE3Q6ZMZ3 975 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 CATSPER4Q7RTX7 472 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 RHPN2Q8IUC4 686 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 ZBTB44Q8NCP5 570 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 SMG8Q8ND04 991 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 FGF14Q92915 247 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 PGBD4Q96DM1 585 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 BORCS6Q96GS4 357 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 TCEANC2Q96MN5 208 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 INO80BQ9C086 356 aaPredicted RBP11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 MINDY3Q9H8M7 445 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 RSAD1Q9HA92 442 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 NUMBLQ9Y6R0 609 aa11.99□□□□□ -0.49
TM9SF1-210ENST00000530563 CNTNAP2Q9UHC6 1331 aa11.98□□□□□ -0.49
TM9SF1-210ENST00000530563 TGM5O43548 720 aa11.98□□□□□ -0.49
TM9SF1-210ENST00000530563 CHMP2AO43633 222 aa11.98□□□□□ -0.49
TM9SF1-210ENST00000530563 GAS2O43903 313 aaKnown RBP11.98□□□□□ -0.49
TM9SF1-210ENST00000530563 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms