RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 CWH43Q9H720 699 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 PRMT7Q9NVM4 692 aaPredicted RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 PLXNA4Q9HCM2 1894 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 MEIS3P2A8K0S8 358 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 SSBP05455 408 aaKnown RBP eCLIP18.63■□□□□ 0.57
SF3B2-209ENST00000530322 PLCG1P19174 1290 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 LONRF3Q496Y0 759 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 NAALADL2Q58DX5 795 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 LINC00301Q8NCQ3 95 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 MRPL38Q96DV4 380 aaKnown RBP18.63■□□□□ 0.57
SF3B2-209ENST00000530322 PRIMPOLQ96LW4 560 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 DRC1Q96MC2 740 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 ZNF396Q96N95 335 aaPredicted RBP18.63■□□□□ 0.57
SF3B2-209ENST00000530322 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
SF3B2-209ENST00000530322 BLOC1S4Q9NUP1 217 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 KCND2Q9NZV8 630 aa18.63■□□□□ 0.57
SF3B2-209ENST00000530322 TFIP11Q9UBB9 837 aaKnown RBP18.63■□□□□ 0.57
SF3B2-209ENST00000530322 A0A1B0GUA9 196 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
SF3B2-209ENST00000530322 EFNA5P52803 228 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 MAPK6Q16659 721 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 ARSHQ5FYA8 562 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 SPOUT1Q5T280 376 aaKnown RBP18.62■□□□□ 0.57
SF3B2-209ENST00000530322 AGMOQ6ZNB7 445 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 LRRC43Q8N309 656 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 KRI1Q8N9T8 703 aaKnown RBP18.62■□□□□ 0.57
SF3B2-209ENST00000530322 SMG8Q8ND04 991 aaKnown RBP18.62■□□□□ 0.57
SF3B2-209ENST00000530322 RSPH1Q8WYR4 309 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 SYMPKQ92797 1274 aaKnown RBP18.62■□□□□ 0.57
SF3B2-209ENST00000530322 PGBD4Q96DM1 585 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 PLAGL2Q9UPG8 496 aa18.62■□□□□ 0.57
SF3B2-209ENST00000530322 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 TTLL13PA6NNM8 815 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 GRM6O15303 877 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 OFD1O75665 1012 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 ITGB1P05556 798 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 PRKCBP05771 671 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 NPTX2P47972 431 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 PEX3P56589 373 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 RAD51AP2Q09MP3 1159 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 PTPROQ16827 1216 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 KLHL23Q8NBE8 558 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 COLGALT1Q8NBJ5 622 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 CNNM3Q8NE01 707 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 RAD54LQ92698 747 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
SF3B2-209ENST00000530322 C17orf75Q9HAS0 396 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 ALG13Q9NP73 1137 aaKnown RBP18.61■□□□□ 0.57
SF3B2-209ENST00000530322 AAASQ9NRG9 546 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 IPPQ9Y573 584 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 PCDHB12Q9Y5F1 795 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 MYO7AQ13402 2215 aa18.61■□□□□ 0.57
SF3B2-209ENST00000530322 SFI1A8K8P3 1242 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 ACKR2O00590 384 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 SPTLC2O15270 562 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 YEATS4O95619 227 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 EDN1P05305 212 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 LAG3P18627 525 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 DMP1Q13316 513 aaPredicted RBP18.6■□□□□ 0.57
SF3B2-209ENST00000530322 PRPF4BQ13523 1007 aaKnown RBP18.6■□□□□ 0.57
SF3B2-209ENST00000530322 MCM6Q14566 821 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 STK38Q15208 465 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 SLC27A1Q6PCB7 646 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 GLB1LQ6UWU2 654 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
SF3B2-209ENST00000530322 SLC17A8Q8NDX2 589 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 SPPL3Q8TCT6 385 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 LMAN2LQ9H0V9 348 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 PRDM6Q9NQX0 595 aa18.6■□□□□ 0.57
SF3B2-209ENST00000530322 A0A0C4DFX4 3053 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 NPHP3-ACAD11A0A0J9YXS1 232 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 CCDC169A6NNP5 214 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 PPP6R2O75170 966 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 DDIT3P35638 169 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 CAMK1Q14012 370 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 CSPP1Q1MSJ5 1256 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 FOXD4L6Q3SYB3 417 aaPredicted RBP18.59■□□□□ 0.57
SF3B2-209ENST00000530322 NOMO2Q5JPE7 1267 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 FOXD4L3Q6VB84 417 aaPredicted RBP18.59■□□□□ 0.57
SF3B2-209ENST00000530322 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.59■□□□□ 0.57
SF3B2-209ENST00000530322 LARP4BQ92615 738 aaKnown RBP18.59■□□□□ 0.57
SF3B2-209ENST00000530322 NTPCRQ9BSD7 190 aaKnown RBP18.59■□□□□ 0.57
SF3B2-209ENST00000530322 PDZD7Q9H5P4 517 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 RSAD1Q9HA92 442 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 ARHGAP28Q9P2N2 729 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 CCDC39Q9UFE4 941 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 USP20Q9Y2K6 914 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 HES2Q9Y543 173 aa18.59■□□□□ 0.57
SF3B2-209ENST00000530322 PHLPP2Q6ZVD8 1323 aa18.58■□□□□ 0.57
SF3B2-209ENST00000530322 K7ERI5 159 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 N4BP3O15049 544 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 FGF18O76093 207 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 NPTXRO95502 500 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 BRD1O95696 1058 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 ITGA4P13612 1032 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 PLS3P13797 630 aa18.58■□□□□ 0.56
SF3B2-209ENST00000530322 LIG1P18858 919 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms