RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TTC25Q96NG3 672 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 NRBP2Q9NSY0 501 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 GIMAP4Q9NUV9 329 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 KIF17Q9P2E2 1029 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 GDF11O95390 407 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 APOA1P02647 267 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 FCER1AP12319 257 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■■□ 23.3
CTNND1-223ENST00000529986 TRIP10Q15642 601 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 PARD3BQ8TEW8 1205 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 GRAMD1AQ96CP6 724 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TBC1D23Q9NUY8 699 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CHMP2BQ9UQN3 213 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 MED7O43513 233 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TCN1P20061 433 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.113e-6■□□□□ 10.9
CTNND1-223ENST00000529986 PEX3P56589 373 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CCDC15Q0P6D6 951 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 DRAP1Q14919 205 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SLC44A4Q53GD3 710 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 ASPRV1Q53RT3 343 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 GJC2Q5T442 439 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 ARL6IP4Q66PJ3 421 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 RAD9BQ6WBX8 426 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TBC1D10CQ8IV04 446 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 INPP5DQ92835 1189 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CCT8L1PA6NM43 557 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ADCY3O60266 1144 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 CCDC22O60826 627 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ANP32DO95626 131 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NR3C1P04150 777 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 MLH1P40692 756 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 CAV1Q03135 178 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 BYSLQ13895 437 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ABCB5Q2M3G0 1257 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TEDDM1Q5T9Z0 273 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ADCK1Q86TW2 530 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TEX9Q8N6V9 391 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 HPS3Q969F9 1004 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NAF1Q96HR8 494 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 SLITRK6Q9H5Y7 841 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 COG4Q9H9E3 785 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 KLHL11Q9NVR0 708 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 FAM187AA6NFU0 413 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 FXR1P51114 621 aaKnown RBP eCLIP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 BLVRAP53004 296 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 MTM1Q13496 603 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NCAPD2Q15021 1401 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TRIM60Q495X7 471 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 SZRD1Q7Z422 152 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 METTL16Q86W50 562 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TMA16Q96EY4 203 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ZBTB18Q99592 522 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 KIF2CQ99661 725 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 EDEM3Q9BZQ6 932 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 SLAIN2Q9P270 581 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 KLHL8Q9P2G9 620 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 USP21Q9UK80 565 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NEDD4P46934 1319 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ZCCHC18P0CG32 403 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 CDC27P30260 824 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 CYLC2Q14093 348 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PTGISQ16647 500 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 MCF2L2Q86YR7 1114 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF280CQ8ND82 737 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 RBM41Q96IZ5 413 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 C9orf72Q96LT7 481 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 AKT3Q9Y243 479 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PPRC1Q5VV67 1664 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PCP11498 1178 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ENO3P13929 434 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 LIFRP42702 1097 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 RWDD4Q6NW29 188 aaKnown RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 EXOC8Q8IYI6 725 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 HACE1Q8IYU2 909 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 CYGBQ8WWM9 190 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 KLF6Q99612 283 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-223ENST00000529986 LRRC4Q9HBW1 653 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 GPR108Q9NPR9 543 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TEKT2Q9UIF3 430 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ATP11BQ9Y2G3 1177 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 KIAA1210Q9ULL0 1709 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PJA2O43164 708 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TTLL1O95922 423 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 AGTP01019 485 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 COASYQ13057 564 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 MKRN3Q13064 507 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms