RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PRR5-ARHGAP8B1AHC4 643 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 TEX28O15482 410 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 ZBTB43O43298 467 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 CHMP2AO43633 222 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 GLUD2P49448 558 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 ARHGAP8P85298 464 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 LMNB2Q03252 620 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 KIAA0319Q5VV43 1072 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 GET4Q7L5D6 327 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 ZNF280BQ86YH2 543 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 HDAC7Q8WUI4 952 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 PLEKHA4Q9H4M7 779 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 C6orf50Q9HD87 102 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 PCDHGA2Q9Y5H1 932 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 KMT2BQ9UMN6 2715 aaPredicted RBP11.72□□□□□ -0.53
COPB1-207ENST00000529866 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 MEIS3P2A8K0S8 358 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 SLC27A2O14975 620 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 GAS7O60861 476 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 NR1I2O75469 434 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 RFPL2O75678 378 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 C1RP00736 705 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 LAMP2P13473 410 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 GNA11P29992 359 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 CIITAP33076 1130 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 MAGEA9P43362 315 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 FUT2Q10981 343 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 DRP2Q13474 957 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 HTR4Q13639 388 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 TARBP2Q15633 366 aaKnown RBP11.71□□□□□ -0.53
COPB1-207ENST00000529866 MTERF2Q49AM1 385 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 XKR3Q5GH77 459 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 RDM1Q8NG50 284 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 ATRIPQ8WXE1 791 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 NLRP4Q96MN2 994 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 RIT2Q99578 217 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 TEKT3Q9BXF9 490 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 UBN1Q9NPG3 1134 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 SPATA6Q9NWH7 488 aaPredicted RBP11.71□□□□□ -0.53
COPB1-207ENST00000529866 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
COPB1-207ENST00000529866 FBXO4Q9UKT5 387 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
COPB1-207ENST00000529866 NUMBLQ9Y6R0 609 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.53
COPB1-207ENST00000529866 ZFHX4Q86UP3 3567 aa11.71□□□□□ -0.54
COPB1-207ENST00000529866 ANHXE9PGG2 379 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 NRP1O14786 923 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 B4GALT3O60512 393 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 DDHD2O94830 711 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 STARD6P59095 220 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 UGCGQ16739 394 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
COPB1-207ENST00000529866 AGMOQ6ZNB7 445 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
COPB1-207ENST00000529866 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
COPB1-207ENST00000529866 ZMYND12Q9H0C1 365 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 RXFP1Q9HBX9 757 aa11.7□□□□□ -0.54
COPB1-207ENST00000529866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.7□□□□□ -0.54
COPB1-207ENST00000529866 EVPLQ92817 2033 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 KANSL1LA0AUZ9 987 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 POTEMA6NI47 508 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 PAPLNO95428 1278 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 POMCP01189 267 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 GLULP15104 373 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 OR1G1P47890 313 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 RCAN1P53805 252 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 ATXN1P54253 815 aaKnown RBP11.69□□□□□ -0.54
COPB1-207ENST00000529866 PFKPQ01813 784 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 DSG1Q02413 1049 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 CREMQ03060 361 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 PRKCQQ04759 706 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 LRCH2Q5VUJ6 765 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 CREB3L3Q68CJ9 461 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 MIER3Q7Z3K6 550 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 MRPL10Q7Z7H8 261 aaKnown RBP11.69□□□□□ -0.54
COPB1-207ENST00000529866 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 LENG9Q96B70 501 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 RTKNQ9BST9 563 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms