RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 NOMO2Q5JPE7 1267 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 PLA2G4FQ68DD2 849 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 LRRC55Q6ZSA7 311 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 KSR1Q8IVT5 923 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 MRPL43Q8N983 215 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 RNF149Q8NC42 400 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 FBXO18Q8NFZ0 1043 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 MTMR9Q96QG7 549 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 TCF25Q9BQ70 676 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 KCNG1Q9UIX4 513 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 SSX2IPQ9Y2D8 614 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 PCDHB2Q9Y5E7 798 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 TMEM150BA6NC51 233 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 PER2O15055 1255 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 DCXO43602 365 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 OFD1O75665 1012 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 ITGA4P13612 1032 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 ATF7P17544 494 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 MCM7P33993 719 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 BCAR1P56945 870 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CYP4A11Q02928 519 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 SPIRE1Q08AE8 756 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 ZNF174Q15697 407 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 EARS2Q5JPH6 523 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CLLU1OSQ5K130 101 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CES5AQ6NT32 575 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 NOTUMQ6P988 496 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 DDX53Q86TM3 631 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 IFNLR1Q8IU57 520 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 SLC39A11Q8N1S5 342 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 MCPH1Q8NEM0 835 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CASP10Q92851 521 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 MSLNLQ96KJ4 702 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 TMEM175Q9BSA9 504 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 LRFN3Q9BTN0 628 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 POLR3CQ9BUI4 534 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 PHF7Q9BWX1 381 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 AGPAT5Q9NUQ2 364 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 HCN4Q9Y3Q4 1203 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 CHD9Q3L8U1 2897 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 LOXHD1Q8IVV2 1947 aa8.7□□□□□ -1.02
CCDC90B-212ENST00000529312 INO80B-WBP1J3KQ70 363 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ZBTB39O15060 712 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 JAK2O60674 1132 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 CSPG5O95196 566 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 LARGE1O95461 756 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 GALTP07902 379 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 RPA1P27694 616 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ARL2P36404 184 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 TECP42680 631 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 MCM2P49736 904 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ZP2Q05996 745 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ITIH3Q06033 890 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 DLX2Q07687 328 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 PPP2R5AQ15172 486 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 RABEP1Q15276 862 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 CLUL1Q15846 466 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ATAT1Q5SQI0 421 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 PLPP4Q5VZY2 271 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ELMSAN1Q6PJG2 1045 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 APBB1IPQ7Z5R6 666 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ADGRD2Q7Z7M1 963 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 VPS52Q8N1B4 723 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 IGSF21Q96ID5 467 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 NECTIN4Q96NY8 510 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 COLEC11Q9BWP8 271 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 EMILIN2Q9BXX0 1053 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 TRIM6Q9C030 488 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 CSRNP2Q9H175 543 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 NRDE2Q9H7Z3 1164 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 RSAD1Q9HA92 442 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 CD320Q9NPF0 282 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 CLEC1BQ9P126 229 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 DPP7Q9UHL4 492 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 GIT1Q9Y2X7 761 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 IRAK3Q9Y616 596 aa8.69□□□□□ -1.02
CCDC90B-212ENST00000529312 ARHGEF35A5YM69 484 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 C2orf71A6NGG8 1288 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 LAD1O00515 517 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 LINC01565O15544 149 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 OR52Z1P0C646 297 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 CTSAP10619 480 aa8.68□□□□□ -1.02
CCDC90B-212ENST00000529312 CYP11B2P19099 503 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms