RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 F8W810 466 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 MARCH6O60337 910 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 LILRB3O75022 631 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 LYPLA2O95372 231 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 POMCP01189 267 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 EPCAMP16422 314 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 SP100P23497 879 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 RFC5P40937 340 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 PTENP60484 403 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 IER5LQ5T953 404 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 CDR2LQ86X02 465 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 SLC7A3Q8WY07 619 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-203ENST00000528744 HES2Q9Y543 173 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
SRPRA-203ENST00000528744 POTEMA6NI47 508 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 B4GALT5O43286 388 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 TSPAN1O60635 241 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 MED24O75448 989 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 CTSAP10619 480 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 GLRA2P23416 452 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 PPM1AP35813 382 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 RARRES1P49788 294 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 ZXDAP98168 799 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 CAPSQ13938 189 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
SRPRA-203ENST00000528744 CALCRLQ16602 461 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 GLB1LQ6UWU2 654 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 DDX53Q86TM3 631 aaKnown RBP12.88□□□□□ -0.35
SRPRA-203ENST00000528744 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 WASF1Q92558 559 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 FBXL18Q96ME1 805 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
SRPRA-203ENST00000528744 MTRQ99707 1265 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 MRPL9Q9BYD2 267 aaKnown RBP12.88□□□□□ -0.35
SRPRA-203ENST00000528744 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 SMOC2Q9H3U7 446 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 POMKQ9H5K3 350 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
SRPRA-203ENST00000528744 NRP1O14786 923 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ASAP2O43150 1006 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 DKC1O60832 514 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRPRA-203ENST00000528744 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
SRPRA-203ENST00000528744 EFEMP2O95967 443 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 NCLP19338 710 aaKnown RBP12.87□□□□□ -0.35
SRPRA-203ENST00000528744 MBTD1Q05BQ5 628 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ZNF174Q15697 407 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ECM1Q16610 540 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 CATSPER3Q86XQ3 398 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-203ENST00000528744 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 GAD1Q99259 594 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ADAM7Q9H2U9 754 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 IPPQ9Y573 584 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 IRAK3Q9Y616 596 aa12.87□□□□□ -0.35
SRPRA-203ENST00000528744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-203ENST00000528744 TMEM221A6NGB7 291 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 C2CD4DB7Z1M9 353 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 M0R296 226 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 NEMFO60524 1076 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 ALDH2P05091 517 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 EDN1P05305 212 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRPRA-203ENST00000528744 SKIP12755 728 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 ARF4P18085 180 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-203ENST00000528744 MCM7P33993 719 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 RAB27AP51159 221 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 PTPN14Q15678 1187 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 RARS2Q5T160 578 aaKnown RBP12.86□□□□□ -0.35
SRPRA-203ENST00000528744 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 CASP10Q92851 521 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 ASIC4Q96FT7 647 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 ZFP42Q96MM3 310 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms