RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 PRIMPOLQ96LW4 560 aa18.6■□□□□ 0.57
HIF3A-211ENST00000528563 NTPCRQ9BSD7 190 aaKnown RBP18.6■□□□□ 0.57
HIF3A-211ENST00000528563 CCDC113Q9H0I3 377 aa18.6■□□□□ 0.57
HIF3A-211ENST00000528563 PRMT7Q9NVM4 692 aaPredicted RBP18.6■□□□□ 0.57
HIF3A-211ENST00000528563 KCND2Q9NZV8 630 aa18.6■□□□□ 0.57
HIF3A-211ENST00000528563 HCSTQ9UBK5 93 aa18.6■□□□□ 0.57
HIF3A-211ENST00000528563 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
HIF3A-211ENST00000528563 TTLL13PA6NNM8 815 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 GRM6O15303 877 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 OFD1O75665 1012 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 PLCG1P19174 1290 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 EFNA5P52803 228 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 AGMOQ6ZNB7 445 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 KRI1Q8N9T8 703 aaKnown RBP18.59■□□□□ 0.57
HIF3A-211ENST00000528563 KLHL23Q8NBE8 558 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 SMG8Q8ND04 991 aaKnown RBP18.59■□□□□ 0.57
HIF3A-211ENST00000528563 RSPH1Q8WYR4 309 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 PGBD4Q96DM1 585 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 DRC1Q96MC2 740 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 EIF2AQ9BY44 585 aaKnown RBP18.59■□□□□ 0.57
HIF3A-211ENST00000528563 C17orf75Q9HAS0 396 aa18.59■□□□□ 0.57
HIF3A-211ENST00000528563 SFI1A8K8P3 1242 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 ACKR2O00590 384 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 ITGB1P05556 798 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 NCLP19338 710 aaKnown RBP18.58■□□□□ 0.57
HIF3A-211ENST00000528563 DDIT3P35638 169 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 NPTX2P47972 431 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 MAPK6Q16659 721 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 PTPROQ16827 1216 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 CNNM3Q8NE01 707 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 SPPL3Q8TCT6 385 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.57
HIF3A-211ENST00000528563 ALG13Q9NP73 1137 aaKnown RBP18.58■□□□□ 0.57
HIF3A-211ENST00000528563 AAASQ9NRG9 546 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 PCDHB12Q9Y5F1 795 aa18.58■□□□□ 0.57
HIF3A-211ENST00000528563 COL4A4P53420 1690 aaPredicted RBP18.58■□□□□ 0.57
HIF3A-211ENST00000528563 PRUNE2Q8WUY3 3088 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 SPTLC2O15270 562 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 PEX3P56589 373 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 CAMK1Q14012 370 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 STK38Q15208 465 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 ATL3Q6DD88 541 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 GLB1LQ6UWU2 654 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 LRRC43Q8N309 656 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 COLGALT1Q8NBJ5 622 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 SLC17A8Q8NDX2 589 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 RAD54LQ92698 747 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 KIFC3Q9BVG8 833 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 LMAN2LQ9H0V9 348 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 ZDHHC9Q9Y397 364 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 IPPQ9Y573 584 aa18.58■□□□□ 0.56
HIF3A-211ENST00000528563 CNTNAP2Q9UHC6 1331 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 NPHP3-ACAD11A0A0J9YXS1 232 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 CCDC169A6NNP5 214 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 K7ERI5 159 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 PPP6R2O75170 966 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 YEATS4O95619 227 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 PRKCBP05771 671 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 LAG3P18627 525 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 PRPF4BQ13523 1007 aaKnown RBP18.57■□□□□ 0.56
HIF3A-211ENST00000528563 MCM6Q14566 821 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 NOMO2Q5JPE7 1267 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 SPOUT1Q5T280 376 aaKnown RBP18.57■□□□□ 0.56
HIF3A-211ENST00000528563 SLC27A1Q6PCB7 646 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 CDR2LQ86X02 465 aaPredicted RBP18.57■□□□□ 0.56
HIF3A-211ENST00000528563 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 SPIRE2Q8WWL2 714 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
HIF3A-211ENST00000528563 TMEM134Q9H6X4 195 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 PRDM6Q9NQX0 595 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 ARHGAP28Q9P2N2 729 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 CCDC39Q9UFE4 941 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 KCNG1Q9UIX4 513 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 USP20Q9Y2K6 914 aa18.57■□□□□ 0.56
HIF3A-211ENST00000528563 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
HIF3A-211ENST00000528563 EYSQ5T1H1 3165 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 BRD1O95696 1058 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 EDN1P05305 212 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 ITGA4P13612 1032 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 PLS3P13797 630 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 DNAJB1P25685 340 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 AFF1P51825 1210 aaKnown RBP18.56■□□□□ 0.56
HIF3A-211ENST00000528563 DMP1Q13316 513 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-211ENST00000528563 DHX8Q14562 1220 aaKnown RBP18.56■□□□□ 0.56
HIF3A-211ENST00000528563 CSPP1Q1MSJ5 1256 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 FOXD4L6Q3SYB3 417 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-211ENST00000528563 KCNT2Q6UVM3 1135 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 FOXD4L3Q6VB84 417 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-211ENST00000528563 GPBP1Q86WP2 473 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 RSAD1Q9HA92 442 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 UBN1Q9NPG3 1134 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 HES2Q9Y543 173 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 BRWD1Q9NSI6 2320 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 KIAA1671Q9BY89 1806 aa18.56■□□□□ 0.56
HIF3A-211ENST00000528563 A0A0C4DFX4 3053 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 INPPL1O15357 1258 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms