RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SRGAP2O75044 1071 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SRGAP2BP0DMP2 458 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 MYBL1P10243 752 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CCND1P24385 295 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 RPS6KA2Q15349 733 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ATP8B3O60423 1300 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 IPO5O00410 1097 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SLC16A4O15374 487 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ENTPD3O75355 529 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 FAM133BQ5BKY9 247 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 INTS5Q6P9B9 1019 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 TMCO5AQ8N6Q1 288 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 TRIML2Q8N7C3 387 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 RBM41Q96IZ5 413 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SH3GL2Q99962 352 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 APOL6Q9BWW8 343 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 RNF146Q9NTX7 359 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 MAD1L1Q9Y6D9 718 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 UBE4BO95155 1302 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 HMGB3O15347 200 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 TBXAS1P24557 533 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 MSH2P43246 934 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 TMED2Q15363 201 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 GPR162Q16538 588 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 DARS2Q6PI48 645 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ENOSF1Q7L5Y1 443 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 RASGRP2Q7LDG7 609 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ERICH1Q86X53 443 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 METTL23Q86XA0 190 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 KIAA2013Q8IYS2 634 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CCDC124Q96CT7 223 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 FAM193BQ96PV7 902 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ZNF302Q9NR11 478 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 NXF1Q9UBU9 619 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 PLAAQ9Y263 795 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ARHGAP23Q9P227 1491 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 PRPSAP2O60256 369 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CD58P19256 250 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ARL4AP40617 200 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CAV1Q03135 178 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 RNF169Q8NCN4 708 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SERPINI1Q99574 410 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 KCND2Q9NZV8 630 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CNOT8Q9UFF9 292 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SEPT3Q9UH03 358 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 IPO11Q9UI26 975 aaKnown RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 PRDM4Q9UKN5 801 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ZNF711Q9Y462 761 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 PFASO15067 1338 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 ESYT2A0FGR8 921 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 MAPK13O15264 365 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 DEAF1O75398 565 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 TJP3O95049 919 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CPP00450 1065 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 CALB1P05937 261 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SOX5P35711 763 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 GCLMP48507 274 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 SF3A3Q12874 501 aaKnown RBP eCLIP7.69□□□□□ -1.182e-7■■■□□ 14.9
CTNND1-218ENST00000528232 DRAP1Q14919 205 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-218ENST00000528232 OR6B2Q6IFH4 312 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 PDZD8Q8NEN9 1154 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.69□□□□□ -1.184e-16■□□□□ 9.4
CTNND1-218ENST00000528232 SLC38A10Q9HBR0 1119 aa7.69□□□□□ -1.18
CTNND1-218ENST00000528232 GPR75-ASB3A0A0A6YYF3 556 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 A0A1W2PQJ5 194 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 GGPS1O95749 300 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 PDHBP11177 359 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 FXR2P51116 673 aaKnown RBP eCLIP7.68□□□□□ -1.182e-8■■■□□ 16.9
CTNND1-218ENST00000528232 PPP4CP60510 307 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 E4F1Q66K89 784 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 CDC42EP5Q6NZY7 148 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 MAD2L2Q9UI95 211 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 NOVA2Q9UNW9 492 aaKnown RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 ARHGEF37A1IGU5 675 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 DENND3A2RUS2 1198 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 SRGAP2CP0DJJ0 459 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 HSPA8P11142 646 aaKnown RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 FGFR2P21802 821 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 TEDDM1Q5T9Z0 273 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 RBM43Q6ZSC3 357 aaKnown RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 LDHDQ86WU2 507 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 TAB3Q8N5C8 712 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 HEXIM2Q96MH2 286 aaKnown RBP7.68□□□□□ -1.18
CTNND1-218ENST00000528232 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 C2orf40Q9H1Z8 148 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 SPAG7O75391 227 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 PYGBP11216 843 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 SERPINB6P35237 376 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 COPB2P35606 906 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 ZNF667Q5HYK9 610 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 KRT39Q6A163 491 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 KRT80Q6KB66 452 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 NFRKBQ6P4R8 1299 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 SCARA5Q6ZMJ2 495 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 ARHGAP22Q7Z5H3 698 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 FBXL16Q8N461 479 aa7.68□□□□□ -1.18
CTNND1-218ENST00000528232 LRGUKQ96M69 825 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms