RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 SLC11A1P49279 550 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 ZNF280BQ86YH2 543 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 TPH2Q8IWU9 490 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 NSUN7Q8NE18 718 aaKnown RBP28.85■■■□□ 2.21
TRIM3-206ENST00000528227 URGCPQ8TCY9 931 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 MTRQ99707 1265 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 GBP3Q9H0R5 595 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 ADAM7Q9H2U9 754 aa28.85■■■□□ 2.21
TRIM3-206ENST00000528227 ZNF318Q5VUA4 2279 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 ITIH3Q06033 890 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 GIT2Q14161 759 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 EIF2AK1Q9BQI3 630 aaKnown RBP28.84■■■□□ 2.21
TRIM3-206ENST00000528227 RSAD1Q9HA92 442 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 XPNPEP1Q9NQW7 623 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 PPP4R2Q9NY27 417 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 CNTNAP2Q9UHC6 1331 aa28.84■■■□□ 2.21
TRIM3-206ENST00000528227 LYPLA2O95372 231 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 CALCRLQ16602 461 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 CES5AQ6NT32 575 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 PBXIP1Q96AQ6 731 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 HSD17B14Q9BPX1 270 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 VN1R3Q9BXE9 311 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 PCDHA12Q9UN75 941 aa28.83■■■□□ 2.21
TRIM3-206ENST00000528227 BTBD18B2RXH4 712 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 DDHD2O94830 711 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 SP100P23497 879 aaPredicted RBP28.82■■■□□ 2.2
TRIM3-206ENST00000528227 AFF1P51825 1210 aaKnown RBP28.82■■■□□ 2.2
TRIM3-206ENST00000528227 SIGLEC14Q08ET2 396 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 PTPN21Q16825 1174 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 NECTIN4Q96NY8 510 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 POMKQ9H5K3 350 aa28.82■■■□□ 2.2
TRIM3-206ENST00000528227 WNT7AO00755 349 aa28.81■■■□□ 2.2
TRIM3-206ENST00000528227 NCLP19338 710 aaKnown RBP28.81■■■□□ 2.2
TRIM3-206ENST00000528227 NHLH1Q02575 133 aa28.81■■■□□ 2.2
TRIM3-206ENST00000528227 MXD4Q14582 209 aaPredicted RBP28.81■■■□□ 2.2
TRIM3-206ENST00000528227 DIS3L2Q8IYB7 885 aaKnown RBP28.81■■■□□ 2.2
TRIM3-206ENST00000528227 SMG8Q8ND04 991 aaKnown RBP28.81■■■□□ 2.2
TRIM3-206ENST00000528227 TTC12Q9H892 705 aaPredicted RBP28.81■■■□□ 2.2
TRIM3-206ENST00000528227 DZANK1Q9NVP4 752 aa28.81■■■□□ 2.2
TRIM3-206ENST00000528227 KANSL3Q9P2N6 904 aa28.81■■■□□ 2.2
TRIM3-206ENST00000528227 NR2E1Q9Y466 385 aa28.81■■■□□ 2.2
TRIM3-206ENST00000528227 TSPAN1O60635 241 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 JAK2O60674 1132 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 ERLIN2O94905 339 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 EPCAMP16422 314 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 PTENP60484 403 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 PCBP1Q15365 356 aaKnown RBP eCLIP28.8■■■□□ 2.2
TRIM3-206ENST00000528227 PTPN14Q15678 1187 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 TMEM87AQ8NBN3 555 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 CNNM3Q8NE01 707 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 SLC22A17Q8WUG5 538 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 TMEM175Q9BSA9 504 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 ANKEF1Q9NU02 776 aa28.8■■■□□ 2.2
TRIM3-206ENST00000528227 NEMFO60524 1076 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 AXLP30530 894 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 NEK4P51957 841 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 FOSBP53539 338 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 RARS2Q5T160 578 aaKnown RBP28.79■■■□□ 2.2
TRIM3-206ENST00000528227 ALYREFQ86V81 257 aaKnown RBP28.79■■■□□ 2.2
TRIM3-206ENST00000528227 IFNLR1Q8IU57 520 aaPredicted RBP28.79■■■□□ 2.2
TRIM3-206ENST00000528227 C12orf76Q8N812 135 aaPredicted RBP28.79■■■□□ 2.2
TRIM3-206ENST00000528227 ASIC4Q96FT7 647 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 TSHZ2Q9NRE2 1034 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 STK39Q9UEW8 545 aa28.79■■■□□ 2.2
TRIM3-206ENST00000528227 DGAT1O75907 488 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 POMCP01189 267 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 MTHFRP42898 656 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 POU5F1BQ06416 359 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 TRIM29Q14134 588 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 TFDP1Q14186 410 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 ASAP3Q8TDY4 903 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 RIPOR3Q96MK2 946 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 FAM193BQ96PV7 902 aaPredicted RBP28.78■■■□□ 2.2
TRIM3-206ENST00000528227 MTMR9Q96QG7 549 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 EIF2AQ9BY44 585 aaKnown RBP28.78■■■□□ 2.2
TRIM3-206ENST00000528227 UBN1Q9NPG3 1134 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 IPPQ9Y573 584 aa28.78■■■□□ 2.2
TRIM3-206ENST00000528227 C2CD4DB7Z1M9 353 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 ALDH2P05091 517 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 WEE2P0C1S8 567 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 ITGA4P13612 1032 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 TXKP42681 527 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 ST3GAL1Q11201 340 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 CAPSQ13938 189 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 KIAA1841Q6NSI8 718 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 KANK3Q6NY19 840 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 NOTUMQ6P988 496 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 FBXL6Q8N531 539 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 CCDC51Q96ER9 411 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 CPB2Q96IY4 423 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 FAN1Q9Y2M0 1017 aa28.77■■■□□ 2.2
TRIM3-206ENST00000528227 INO80B-WBP1J3KQ70 363 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 NRP1O14786 923 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 INPPL1O15357 1258 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 ARL2P36404 184 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 RARRES1P49788 294 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 MBTD1Q05BQ5 628 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 ZBTB33Q86T24 672 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 PPFIBP1Q86W92 1011 aa28.76■■■□□ 2.19
TRIM3-206ENST00000528227 SUGP1Q8IWZ8 645 aaKnown RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms