RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 Q8TCH9 128 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 MTMR8Q96EF0 704 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 LOXL4Q96JB6 756 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 IFT122Q9HBG6 1241 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 hCG_2014768A0A024R1R8 64 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ZNF623O75123 536 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 LTA4HP09960 611 aaKnown RBP7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ABHD15Q6UXT9 468 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 PUS7Q96PZ0 661 aaKnown RBP7.4□□□□□ -1.22
CPNE3-207ENST00000523588 OR14A2Q96R54 314 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ASPSCR1Q9BZE9 553 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ENKD1Q9H0I2 346 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ZNF277Q9NRM2 450 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-207ENST00000523588 HOMER2Q9NSB8 354 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.22
CPNE3-207ENST00000523588 A0A1W2PRX2 142 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 FZD9O00144 591 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 MEF2AQ02078 507 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-207ENST00000523588 FOXL1Q12952 345 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 GRM7Q14831 915 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 ADRM1Q16186 407 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 ABCB5Q2M3G0 1257 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 ANO4Q32M45 955 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 BRDTQ58F21 947 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-207ENST00000523588 KRT40Q6A162 431 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 CMTM4Q8IZR5 234 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 FAXDC2Q96IV6 333 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 IL23AQ9NPF7 189 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 SMPD4Q9NXE4 827 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 PLA2G3Q9NZ20 509 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 JAG2Q9Y219 1238 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 GPR45Q9Y5Y3 372 aa7.39□□□□□ -1.23
CPNE3-207ENST00000523588 UBE2QL1A1L167 161 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 MT-CO1P00395 513 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 RBP3P10745 1247 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 OSMP13725 252 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 AGXTP21549 392 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 CTSSP25774 331 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-207ENST00000523588 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
CPNE3-207ENST00000523588 C19orf54Q5BKX5 351 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 PGM2L1Q6PCE3 622 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 BTNL9Q6UXG8 535 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 Q6ZSN1 163 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 GLB1L3Q8NCI6 653 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-207ENST00000523588 SNX33Q8WV41 574 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 FATE1Q969F0 183 aa7.38□□□□□ -1.23
CPNE3-207ENST00000523588 TNKSO95271 1327 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA12O60330 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 ANAPC15P60006 121 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 IGBP1P78318 339 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 POLNQ7Z5Q5 900 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 LILRA3Q8N6C8 439 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-207ENST00000523588 STAG1Q8WVM7 1258 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 TMEM176AQ96HP8 235 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 FUBP3Q96I24 572 aaKnown RBP eCLIP7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PAWRQ96IZ0 340 aaKnown RBP7.37□□□□□ -1.23
CPNE3-207ENST00000523588 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 SLC2A13Q96QE2 648 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 ACE2Q9BYF1 805 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA9Q9Y5G4 932 aaKnown RBP7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA8Q9Y5G5 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA7Q9Y5G6 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA6Q9Y5G7 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA3Q9Y5H0 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 PCDHGA2Q9Y5H1 932 aa7.37□□□□□ -1.23
CPNE3-207ENST00000523588 B8ZZF3 427 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 PRAMEF4O60810 478 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 CFBP00751 764 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 MYBL2P10244 700 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 MSX2P35548 267 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-207ENST00000523588 SLC5A3P53794 718 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 WNT3AP56704 352 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 MBNL2Q5VZF2 373 aaKnown RBP7.36□□□□□ -1.23
CPNE3-207ENST00000523588 FAM111BQ6SJ93 734 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 AMOTL1Q8IY63 956 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 RIN2Q8WYP3 895 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-207ENST00000523588 TCF25Q9BQ70 676 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 TLR9Q9NR96 1032 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
CPNE3-207ENST00000523588 RPTORQ8N122 1335 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 SHTN1A0MZ66 631 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 COMTP21964 271 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 CASRP41180 1078 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 KRT85P78386 507 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 PPP3CAQ08209 521 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 MALLQ13021 153 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 PCBP2Q15366 365 aaKnown RBP eCLIP7.35□□□□□ -1.23
CPNE3-207ENST00000523588 SPATS1Q496A3 300 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 MAMDC4Q6UXC1 1216 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 JADE3Q92613 823 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 C1QTNF3Q9BXJ4 246 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 GREM2Q9H772 168 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 TYW1Q9NV66 732 aaKnown RBP7.35□□□□□ -1.23
CPNE3-207ENST00000523588 MKS1Q9NXB0 559 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
CPNE3-207ENST00000523588 NCDNQ9UBB6 729 aa7.35□□□□□ -1.23
CPNE3-207ENST00000523588 SH3BP1Q9Y3L3 701 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms