RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TPH2Q8IWU9 490 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 CPB2Q96IY4 423 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 FAM20AQ96MK3 541 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 JPH2Q9BR39 696 aaPredicted RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 APOL6Q9BWW8 343 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 PRG3Q9Y2Y8 225 aaPredicted RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 NR2E1Q9Y466 385 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
MRPS28-209ENST00000522987 DOCK6Q96HP0 2047 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 CDKL5O76039 1030 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 LARGE1O95461 756 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 BRD1O95696 1058 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 CTSAP10619 480 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
MRPS28-209ENST00000522987 RAB27AP51159 221 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 AK2P54819 239 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 TCF15Q12870 199 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 EPHA7Q15375 998 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 FAM193BQ96PV7 902 aaPredicted RBP17.23■□□□□ 0.35
MRPS28-209ENST00000522987 DHX33Q9H6R0 707 aaKnown RBP17.23■□□□□ 0.35
MRPS28-209ENST00000522987 RSAD1Q9HA92 442 aa17.23■□□□□ 0.35
MRPS28-209ENST00000522987 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
MRPS28-209ENST00000522987 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 PFKFB2O60825 505 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 ZNF623O75123 536 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 GCFC2P16383 781 aaKnown RBP17.22■□□□□ 0.35
MRPS28-209ENST00000522987 XBP1P17861 261 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 AVPR2P30518 371 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 HOXA11P31270 313 aaPredicted RBP17.22■□□□□ 0.35
MRPS28-209ENST00000522987 MTHFRP42898 656 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 ITIH3Q06033 890 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 CABP7Q86V35 215 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
MRPS28-209ENST00000522987 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 HES2Q9Y543 173 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 TRIP11Q15643 1979 aa17.22■□□□□ 0.35
MRPS28-209ENST00000522987 F8W810 466 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 WNT7AO00755 349 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.35
MRPS28-209ENST00000522987 ERLIN2O94905 339 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 KLRC2P26717 231 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 RFC5P40937 340 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 PTPN5P54829 565 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 TAS1R1Q7RTX1 841 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 SRGAP1Q7Z6B7 1085 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 FERMT3Q86UX7 667 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 CDR2LQ86X02 465 aaPredicted RBP17.21■□□□□ 0.35
MRPS28-209ENST00000522987 C4orf19Q8IY42 314 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
MRPS28-209ENST00000522987 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
MRPS28-209ENST00000522987 NECTIN4Q96NY8 510 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 MTRQ99707 1265 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
MRPS28-209ENST00000522987 INO80B-WBP1J3KQ70 363 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 NRP1O14786 923 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 CNPP09543 421 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 ITGA4P13612 1032 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 KRT2P35908 639 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 MLH1P40692 756 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 OR1G1P47890 313 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 ATAT1Q5SQI0 421 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 OTUD6AQ7L8S5 288 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 MRPL10Q7Z7H8 261 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 ASAP3Q8TDY4 903 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 RABGGTAQ92696 567 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 GAD1Q99259 594 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
MRPS28-209ENST00000522987 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 DZANK1Q9NVP4 752 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
MRPS28-209ENST00000522987 H0Y858 1186 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 TSPAN1O60635 241 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 GLYCTKQ8IVS8 523 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 FAM177A1Q8N128 213 aaPredicted RBP17.19■□□□□ 0.34
MRPS28-209ENST00000522987 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 ZFP42Q96MM3 310 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 MARCH5Q9NX47 278 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 MIOSQ9NXC5 875 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms