RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 BAZ2AQ9UIF9 1905 aaKnown RBP7.94□□□□□ -1.14
SDCBP-210ENST00000522843 PRKAB2O43741 272 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 BAIAP3O94812 1187 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 GJB5O95377 273 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 CDK8P49336 464 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
SDCBP-210ENST00000522843 IKZF1Q13422 519 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 DSC3Q14574 896 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 TCEAL5Q5H9L2 206 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 C1QL4Q86Z23 238 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 CERS3Q8IU89 383 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 FBXO16Q8IX29 292 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-210ENST00000522843 EDAQ92838 391 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 ISL2Q96A47 359 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-210ENST00000522843 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 FTOQ9C0B1 505 aaKnown RBP eCLIP7.94□□□□□ -1.145e-6■□□□□ 9.5
SDCBP-210ENST00000522843 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 CCDC8Q9H0W5 538 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-210ENST00000522843 SLC38A10Q9HBR0 1119 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 PRKAG3Q9UGI9 489 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 SWAP70Q9UH65 585 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 CTNND2Q9UQB3 1225 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 HDAC5Q9UQL6 1122 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 COL4A6Q14031 1691 aa7.94□□□□□ -1.14
SDCBP-210ENST00000522843 TCRBV5S4A2TA0A5A2 114 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 ZEB2O60315 1214 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 NDUFB10O96000 172 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 CENPBP07199 599 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 SUPT20HL2P0C7V6 817 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 PDE6AP16499 860 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 MAPK1P28482 360 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 AFMP43652 599 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 VCPP55072 806 aaKnown RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 DLX2Q07687 328 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 LILRA6Q6PI73 481 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 FAM214BQ7L5A3 538 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 EEPD1Q7L9B9 569 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 ASCL5Q7RTU5 278 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 CHST13Q8NET6 341 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 EAF2Q96CJ1 260 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 PABPC5Q96DU9 382 aaKnown RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 MRPL38Q96DV4 380 aaKnown RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 RAD9AQ99638 391 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 A1CFQ9NQ94 594 aaKnown RBP7.93□□□□□ -1.14
SDCBP-210ENST00000522843 GTF2IRD1Q9UHL9 959 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 TNNQ9UQP3 1299 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 Q9Y3F1 56 aa7.93□□□□□ -1.14
SDCBP-210ENST00000522843 KMT2BQ9UMN6 2715 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 TMEM221A6NGB7 291 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 F5H6K3 240 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 M0R296 226 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 NBNO60934 754 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 CXCL10P02778 98 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 CHGBP05060 677 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 GNAI3P08754 354 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 KCNJ6P48051 423 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 KLRC3Q07444 240 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 SLFN5Q08AF3 891 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 SMAD2Q15796 467 aaKnown RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 C12orf60Q5U649 245 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 IQSEC1Q6DN90 963 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 LCNL1Q6ZST4 164 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 C16orf86Q6ZW13 317 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 PRPF38AQ8NAV1 312 aaKnown RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 KCNB2Q92953 911 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 CCDC17Q96LX7 622 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 CRNKL1Q9BZJ0 848 aaKnown RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 API5Q9BZZ5 524 aaKnown RBP7.92□□□□□ -1.14
SDCBP-210ENST00000522843 KANSL2Q9H9L4 492 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 HOMER2Q9NSB8 354 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 NCOR2Q9Y618 2525 aa7.92□□□□□ -1.14
SDCBP-210ENST00000522843 CACNA1GO43497 2377 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 PNMA6FA0A0J9YX94 578 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 TREHO43280 583 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 MBTPS2O43462 519 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 ZBED4O75132 1171 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 KRT37O76014 449 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 MYL3P08590 195 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 PPP2R3AQ06190 1150 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 CLUL1Q15846 466 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 DUSP28Q4G0W2 176 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 ZC3H12AQ5D1E8 599 aaKnown RBP7.91□□□□□ -1.14
SDCBP-210ENST00000522843 FYB2Q5VWT5 728 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDCBP-210ENST00000522843 SYDE1Q6ZW31 735 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-210ENST00000522843 PDZD3Q86UT5 571 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 RNF214Q8ND24 703 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 MORC4Q8TE76 937 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 BCO2Q9BYV7 579 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 ARMT1Q9H993 441 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 FBXO40Q9UH90 709 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 ZNF532Q9HCE3 1301 aa7.91□□□□□ -1.14
SDCBP-210ENST00000522843 ASB14A6NK59 587 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 PROB1E7EW31 1015 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 E9PSI1 815 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms