RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 TNFRSF1AP19438 455 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 DBPQ10586 325 aaPredicted RBP7.43□□□□□ -1.22
LINC01609-202ENST00000522778 CST9Q5W186 159 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 ZNF585AQ6P3V2 769 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 CTU1Q7Z7A3 348 aaKnown RBP7.43□□□□□ -1.22
LINC01609-202ENST00000522778 PTRH1Q86Y79 214 aaKnown RBP7.43□□□□□ -1.22
LINC01609-202ENST00000522778 EXOC2Q96KP1 924 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 DEF6Q9H4E7 631 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 ARHGAP28Q9P2N2 729 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 ATP23Q9Y6H3 246 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
LINC01609-202ENST00000522778 MEGF6O75095 1541 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 NFAT5O94916 1531 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.42□□□□□ -1.22
LINC01609-202ENST00000522778 C1QTNF3-AMACRE9PGA6 284 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 TRAF5O00463 557 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 MATN3O15232 486 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 GABREP78334 506 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 DDR1Q08345 913 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 CRY1Q16526 586 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 ZNF568Q3ZCX4 644 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 PNMA8AQ86V59 439 aaPredicted RBP7.42□□□□□ -1.22
LINC01609-202ENST00000522778 ZC3H7AQ8IWR0 971 aaKnown RBP7.42□□□□□ -1.22
LINC01609-202ENST00000522778 PCDH19Q8TAB3 1148 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 DHRS4Q9BTZ2 278 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 MEGF9Q9H1U4 602 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 CBLCQ9ULV8 474 aa7.42□□□□□ -1.22
LINC01609-202ENST00000522778 RANBP2P49792 3224 aaKnown RBP7.41□□□□□ -1.22
LINC01609-202ENST00000522778 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 FAM90A27PA6NNH2 459 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 ARVCFO00192 962 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 MAN2B1O00754 1011 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 WNT9AO14904 365 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 GSTA4O15217 222 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 CSF2RBP32927 897 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 DNM2P50570 870 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 FAM47CQ5HY64 1035 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 FIGNQ5HY92 759 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 OSTM1Q86WC4 334 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 REXO1L1PQ8IX06 675 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 PIGBQ92521 554 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 KLC2Q9H0B6 622 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 SRP68Q9UHB9 627 aaKnown RBP7.41□□□□□ -1.22
LINC01609-202ENST00000522778 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
LINC01609-202ENST00000522778 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 LTN1O94822 1766 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 ITGB4P16144 1822 aa7.41□□□□□ -1.22
LINC01609-202ENST00000522778 BRCA2P51587 3418 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 CCDC66A2RUB6 948 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 PRAMEF25A6NGN4 478 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 KCNK3O14649 394 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 CNOT4O95628 575 aaKnown RBP7.4□□□□□ -1.22
LINC01609-202ENST00000522778 CRTAMO95727 393 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 AMY2AP04746 511 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 APPP05067 770 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 AMY2BP19961 511 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 GJA4P35212 333 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 USP10Q14694 798 aaKnown RBP7.4□□□□□ -1.22
LINC01609-202ENST00000522778 PALM2Q8IXS6 379 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 SH3RF3Q8TEJ3 882 aaPredicted RBP7.4□□□□□ -1.22
LINC01609-202ENST00000522778 DEPDC7Q96QD5 511 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 LRRC37BQ96QE4 947 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 LMF1Q96S06 567 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 CDK5RAP1Q96SZ6 601 aaKnown RBP7.4□□□□□ -1.22
LINC01609-202ENST00000522778 NDOR1Q9UHB4 597 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 SLC4A7Q9Y6M7 1214 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 RNF123Q5XPI4 1314 aa7.4□□□□□ -1.22
LINC01609-202ENST00000522778 KIAA0100Q14667 2235 aaKnown RBP7.4□□□□□ -1.23
LINC01609-202ENST00000522778 CACNA1AO00555 2505 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 MAP2P11137 1827 aaKnown RBP7.39□□□□□ -1.23
LINC01609-202ENST00000522778 ESYT3A0FGR9 886 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 ZNF888P0CJ79 500 aaPredicted RBP7.39□□□□□ -1.23
LINC01609-202ENST00000522778 JAM2P57087 298 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 ZXDAP98168 799 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 RASA3Q14644 834 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 DPP8Q6V1X1 898 aaPredicted RBP7.39□□□□□ -1.23
LINC01609-202ENST00000522778 C16orf59Q7L2K0 433 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 C2CD5Q86YS7 1000 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 KATNBL1Q9H079 304 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 CD248Q9HCU0 757 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 ASAP1Q9ULH1 1129 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 PTPN22Q9Y2R2 807 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 TSC22D4Q9Y3Q8 395 aa7.39□□□□□ -1.23
LINC01609-202ENST00000522778 RGPD2P0DJD1 1756 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 H0YIN7 160 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 POLRMTO00411 1230 aaKnown RBP7.38□□□□□ -1.23
LINC01609-202ENST00000522778 SELENOPP49908 381 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 RRADP55042 308 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 LONRF2Q1L5Z9 754 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 WDR72Q3MJ13 1102 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 SPRED1Q7Z699 444 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC01609-202ENST00000522778 SYNE4Q8N205 404 aa7.38□□□□□ -1.23
LINC01609-202ENST00000522778 CISD2Q8N5K1 135 aaKnown RBP7.38□□□□□ -1.23
LINC01609-202ENST00000522778 ZNF622Q969S3 477 aaKnown RBP eCLIP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms